Azospirillum sp. TSA2s: E6C67_27535
Help
Entry
E6C67_27535 CDS
T10588
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
azp Azospirillum sp. TSA2s
Pathway
azp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E6C67_27535 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azp03019
]
E6C67_27535 (pnp)
03016 Transfer RNA biogenesis [BR:
azp03016
]
E6C67_27535 (pnp)
Enzymes [BR:
azp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E6C67_27535 (pnp)
Messenger RNA biogenesis [BR:
azp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E6C67_27535 (pnp)
Transfer RNA biogenesis [BR:
azp03016
]
Prokaryotic type
tRNA degradation factors
E6C67_27535 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QCG97516
LinkDB
All DBs
Position
1:1131392..1133503
Genome browser
AA seq
703 aa
AA seq
DB search
MFTVHRKEIEWGGRKLVLETGKIARQANGAVLVTYGDTTVLCTAVAAKAPKPGVDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPTEKETLVSRLIDRPIRPLFADGFRNETQVVCTVLSH
DLENDPDIVAMVGASAALTISGIPFLGPIGAARVGYKNGQYILNPTMDEVEDSDLDLVVA
GTVEGVLMVESEAKELTEEVMLGAVMFGHTNFQPVINMIIDLAEEAAKDPWDLPEPAYDR
KALKARLRETVGSDVEAAYTETVKQSRYEKVGAAKAKALETLAEEFDAQSIGFEFKELEA
DILRGAVLKTGRRIDGRDTKTVRPIVSEVGILPRAHGSALFTRGETQALVVTTLGTSQDE
QIIDALEGEYREHFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPLLPKKEDFP
YTLRVVSEVTESNGSSSMATVCGTSLSLMDAGAPLARPVAGIAMGLIKEDSGFAVLSDIL
GDEDHLGDMDFKVAGTEVGVTALQMDIKITSITEEIMKIALGQAKDGRLHILGEMAKALT
GAREGVNENAPRITVINIPKEKIRDVIGSGGKVIREIVEQTGAKIDIDDDGTVKVSAVDQ
KKSDAAIEWIKGIVAEPEMNVVYTGKVVKVVDFGAFVNFLGSRDGLVHISELAQQRVGKV
SDVVSQGDSVKVKVIGFDDRGKVKLSMKQVDQTTGEDLTKKAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgttcactgttcatcgcaaagaaatcgaatggggcgggcgcaagctggtcctggaaacg
ggcaagatcgcccgtcaggccaacggcgcggttctggtcacctatggtgacaccaccgtc
ctgtgcaccgccgtcgccgccaaggcgccgaagccgggcgtcgatttcttcccgctgacc
gtcaattaccaggaaaaggcgttcgcggccggcaagatccccggcggcttcttcaagcgc
gaaggccgtccgaccgagaaggaaacgctggtcagccgcctgatcgaccgtccgatccgt
ccgctgttcgccgatggcttccgcaacgagacgcaggtcgtctgcaccgtgctgagccat
gatctggagaacgatccggacatcgtggcgatggtcggcgcctcggccgccctgacgatc
tccggcatcccgttcctgggtccgatcggcgccgcccgcgtcggctacaagaacggccag
tacatcctgaacccgaccatggacgaggtcgaggacagcgacctggatctggtcgtcgcc
ggcaccgtcgaaggcgtgctgatggtcgaatcggaagccaaggagctgaccgaagaggtc
atgctgggcgccgtcatgttcggccacaccaacttccagccggtgatcaacatgatcatc
gacctggccgaggaagccgccaaggacccgtgggacctgccggagccggcctatgaccgc
aaggccctgaaggcccgcctgcgcgagaccgtcgggtcggacgtcgaggccgcctacacc
gagacggtgaagcagagccgttatgagaaggtcggcgccgccaaggcgaaggccctcgag
acgctggccgaggaattcgacgcccagtcgatcggtttcgagttcaaggagcttgaggcc
gacatcctgcgcggcgccgtcctgaagaccggccgccgcatcgacggccgcgacaccaag
accgtgcgcccgatcgtgtcggaagtcggcatcctgccgcgcgcccacggttcggccctg
ttcacccgcggcgaaacccaggcgctggtcgtcaccacgctgggcaccagccaggacgag
cagatcatcgacgcgctcgaaggcgagtaccgcgagcacttcatgctgcactacaacttc
cccccgtactcggtgggtgaagccggccgcatgggcagcccgggccgccgcgagatcggc
cacggcaagctggcgtggcgcgcgatccatccgctgctgccgaagaaggaagatttcccc
tacacgctgcgcgtcgtgtcggaagtcacggagtccaacggctcctcctcgatggccacc
gtctgcggcacctcgctgtcgctgatggacgccggcgcgccgctggcccgtccggtcgcc
ggcatcgccatgggcctgatcaaggaagacagcggcttcgccgtcctgtccgacatcctg
ggtgacgaagatcacctgggcgacatggacttcaaggtcgccggcaccgaggtcggcgtc
accgcgctgcagatggacatcaagatcacctcgatcaccgaggagatcatgaagatcgcg
ctgggccaggccaaggacggccgcctgcacatcctgggcgagatggccaaggcgctgacc
ggtgcccgcgaaggcgtcaacgagaacgccccgcgcatcaccgtcatcaacatcccgaag
gagaagatccgcgacgtgatcggctccggcggcaaggtgatccgcgagatcgtggagcag
accggcgccaagatcgacatcgacgacgacggcaccgtcaaggtttcggccgtcgatcag
aagaagtcggacgccgccatcgagtggatcaagggcatcgtcgccgagccggagatgaac
gtcgtctacaccggcaaggttgtgaaggtcgtcgatttcggcgccttcgtgaacttcctg
ggctcgcgcgacggcctcgtccacatctccgagctggcgcagcagcgcgtcggcaaggtg
tcggacgtcgtgtcgcagggtgactcggtgaaggtcaaggtcatcggcttcgacgaccgc
ggcaaggtcaagctgtcgatgaagcaggtcgaccagaccaccggcgaggacctgaccaag
aaggcggagtga
DBGET
integrated database retrieval system
