Azospirillum sp. TSA2s: E6C67_28425
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Entry
E6C67_28425 CDS
T10588
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
azp Azospirillum sp. TSA2s
Brite
KEGG Orthology (KO) [BR:
azp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azp03400
]
E6C67_28425 (addB)
Enzymes [BR:
azp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6C67_28425 (addB)
DNA repair and recombination proteins [BR:
azp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E6C67_28425 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Katanin_con80
Motif
Other DBs
NCBI-ProteinID:
QCG97670
UniProt:
A0A4P7Z8F8
LinkDB
All DBs
Position
1:complement(1306123..1309098)
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AA seq
991 aa
AA seq
DB search
MLPDSSTPKVYSIPAGAPFVDMLAAGIMERVGGDPMAMAGVTVLLPTRRACRALQAAFLR
RSGGQPTLLPRMAPLGELDAGDLSLTEEELPEVPLDLPEAISPLNRQMTLARLILGADGL
SATTAQAVRLGADLGRLIDAVWTERAGFEKLESLVPEDYAEHWQVTLKFLRIITEVWPAI
LESTGETDPAKRRNLALETQAALWQATPPPGMVIAAGSTGSIAATTELLSVIARLPQGAV
VLPGLDTGADDTIWDAIAGDESHPQHGLSQLIHLLGVTRAEVQPWTDATEPRGARARLIA
EAMRPAATTEGWRELSGVDASALDGLTRIDAATSEEEAQVIALLMRHALETPTRTAALIT
PDRNLGRRVAMALARWGILVNDSGGQPLAHTAVGTYLRLTAELVASRVHPLALLALAKHP
MAAGGRDSADFRSAARALERIVLRGPRPAEGFDGVLAALEQAERFDHEEQQEFLRTWLVD
IGQRAAPFLEALTADTPLADLVRAHVAFCESLAADDELTGAERLWRQDDGEEAARFVHDL
LDAAEGFPAIPAKDYPALLDALMSARAVRPRYGLHPRLFILGPMEARLQHLDLTILGGLN
EGTWPPAASADPWMSRPMRRDFGLPSPERLVGMSAHDFAHACGAPEVVLTRAARVEGTPT
VPSRWLLRLETVLKALNLDGVIEERGACWLGWARGLDEPDRVQPVAAPEPRPPLTARPRK
LSVTEIETWMRDPYAIYARHALRLRALDPIAADPGASDRGQIIHDTLDAFVREYPGPLPH
DALDRLIALGRERFGPLLRSHPDVWAFWWPRFERVAGWFVDLERERRPRLRPLATEVPGR
LELSGPGGPFTLTAKADRIDRGPDGLVVIDYKTGTPPSTREIELGFAPQLPLEAAIAAAG
GFSGVDKGAVAELTFWRLSGGDPAGEEKPVKGDPAALGEEARAGLEALIAQFDDPNTPYR
SRPRPAMAPRYTDYAHLARVQEWSSGGGEGE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccgatagctccacccccaaagtctacagcatccccgcaggcgctcccttcgtc
gacatgctggcggcggggatcatggagcgggtgggcggcgacccgatggcgatggccggg
gtcaccgtgctgctgccgacgcggcgcgcctgccgggcgctgcaggcggccttcctgcgt
cgctccggcgggcagccgacgctgctgccgcggatggcgccgctcggcgaactggatgcc
ggcgacctcagcctgaccgaggaggaactgcccgaggtcccgctcgacctgccggaagcg
atctcgccgttgaaccggcagatgacgctggcgcggctgatcctgggggccgacgggctg
tcggcaacgacggcgcaggcggtgcggctgggcgccgaccttggccggctgatcgacgcg
gtgtggaccgagcgcgccggcttcgagaagctcgagtcgctggtgccggaggattatgcc
gagcactggcaggtcacccttaaattcctgcgcatcatcaccgaggtctggcccgccatc
ctcgagtcgaccggcgagaccgacccggccaagcgccgcaatctggcgctggagacgcag
gccgccctgtggcaggccactccgccgccgggcatggtgatcgccgccggctccaccggc
tccatcgccgcgacgacggagctgctgtcggtcatcgcccggctgccgcagggggcggtg
gtgctgcccggcctcgacaccggggccgacgacacgatctgggacgccatcgccggcgac
gaatcccacccgcagcatggcctgtcccaactgatccatctgctgggcgtcacccgcgcc
gaggtgcagccctggaccgacgcgaccgagccgcgcggcgcccgcgcccgcctgatcgcc
gaggcgatgcgcccggcggcgaccaccgaaggctggcgcgagctgtcgggggtggatgcc
tcggcgctggacgggctgacccgcatcgacgccgccacttcggaggaggaggcgcaggtc
atcgcgctgctgatgcgccatgcgctggaaacgccgaccaggaccgccgccctcatcacc
cccgaccgcaacctgggccggcgggtcgccatggcgctggcgcgctggggcattctggtc
aacgactcgggcggccagccgctcgcccacaccgcggtcggcacctatctgcggctgacg
gcggagctggtggcgagccgcgtccacccgctggccctgctggcgctggccaagcatccg
atggcggcgggcggccgcgactcggcggatttccgctccgccgcccgcgcgctggagcgc
atcgtgctgcgcggcccccgaccggccgagggcttcgacggcgtgctcgccgcactggag
caggccgagcgcttcgaccacgaggagcagcaggagttcctgcgcacatggctggtcgac
atcggccagcgcgccgcccccttccttgaggcgctgaccgccgacacgccgctggccgac
ctcgtccgcgcccatgtcgccttctgcgaatcgctggccgccgacgacgaactgaccggg
gcggagcggctgtggcgccaggatgacggcgaggaggcggcgcgcttcgtccacgacctg
ctcgacgcggccgaaggcttcccggcgatcccggccaaggattacccggcgctgctcgat
gcgctgatgagcgcgcgggcagtgcgtccccgctatggcctgcacccacgcctgttcatc
ctgggtccgatggaggcgcgcctccagcatctcgacctgaccatcttgggcgggctgaac
gaggggacatggccgccggcggcatccgccgatccgtggatgtcgcggccgatgcggcgc
gattttggcctgcccagcccggaacggctggtcggcatgtcggcccacgacttcgcccac
gcctgcggtgcgccggaggtggtgctgacccgcgccgcgcgggtggagggcacgccgacc
gtgccgtcgcgctggctcctgcggctggaaaccgtgctgaaggcgctgaacctggacggc
gtgatcgaggagcgcggcgcctgctggctcggctgggcgcgcgggttggacgagccggac
cgggtgcagccggtggccgctcccgaaccgcgcccgccgctgaccgcccggccgcgcaag
ctgtcggtgaccgagatcgagacctggatgcgcgatccctacgccatctacgcccgccat
gccctgcggctgcgcgcactcgaccccatcgccgccgatccgggggcgtcggaccgcggc
cagatcatccacgacacgctcgacgccttcgtccgcgagtatccggggccgctgccgcat
gacgcgctcgaccggctgatcgcgctggggcgggagcgcttcgggccgctgctgcgcagc
catcccgacgtctgggccttctggtggccgcgcttcgagcgggtggccggctggttcgtc
gatctggagcgcgagcgccgtccccgcctgcgtccgctggcgaccgaggtgccgggccgg
ctggagctgtccggccccggcggccccttcaccctgaccgccaaggccgaccgcatcgac
cgtggccccgacgggctggtggtgatcgactacaagaccggcaccccgccgagcacgcgg
gagatcgagcttggcttcgccccgcagctgccactagaggccgccatcgcggcggcgggc
gggttcagcggcgtggacaagggagctgtggccgaactgaccttctggcgcctgtccggc
ggcgatccggccggcgaggaaaagccggtgaagggcgacccggcggcattgggcgaagag
gcacgggccggtctggaggcgctgatcgcgcagttcgacgacccgaacaccccctaccgc
tcccgcccgcggccggcaatggcgccgcgctacaccgactatgcgcatctcgcccgcgtc
caggaatggtcgtccggcggcggggagggagagtga
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