Nitrogeniibacter mangrovi: G3580_01685
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Entry
G3580_01685 CDS
T06549
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
azq
Nitrogeniibacter mangrovi
Pathway
azq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
azq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3580_01685 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azq03400
]
G3580_01685 (xth)
Enzymes [BR:
azq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
G3580_01685 (xth)
DNA repair and recombination proteins [BR:
azq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
G3580_01685 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF5648
Motif
Other DBs
NCBI-ProteinID:
QID16451
UniProt:
A0A6C1AYK9
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All DBs
Position
complement(384174..384953)
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AA seq
259 aa
AA seq
DB search
MLRVITINLNGIRSASRKGFFEWMAGQDADIVCLQELKAQVNDLSEDMRSPPGYKGFFHP
AEKKGYSGVGLYARKAPERVIEGLGNAEFDAEGRYLEADFGNLSVISLYLPSGSSSEERQ
AAKYRFMDIFLPHMRELIASGREVIVCGDWNIAHKEADLRNWKSNQKNSGFLPEERAWLT
RLFDEVGWKDVYRQLHPEATDACYTWWSNRGQAWAKNVGWRLDYQIATPGIAARARRASV
YKEARFSDHAPLTVDYDDA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcgtcatcaccatcaacctcaacggcatccgctccgcctcgcgcaagggcttt
ttcgaatggatggcggggcaggacgccgacatcgtctgcctgcaggaactcaaggcccag
gtgaacgacctgtcagaggatatgcgttcgccgccggggtacaagggattttttcaccca
gccgaaaagaagggctacagcggcgtcgggctgtatgcgcgcaaggcgcccgagcgggtg
atcgagggcctcggcaacgccgagttcgacgccgaggggcgctacctggaagccgacttc
ggcaacctgtcggtgatctcgctgtacctgccctcgggctccagttcggaggagcggcag
gcggccaagtaccgcttcatggacatcttcctgccccatatgcgcgagctcatcgcctcg
ggacgcgaggtcatcgtctgcggcgactggaacatcgcccacaaggaggccgatctcagg
aactggaaatccaaccagaagaattccggcttcctccccgaggagcgcgcctggctcacc
cgcctgttcgacgaggtcggctggaaggacgtctaccgccagctgcatccggaggccact
gatgcatgctacacgtggtggtcgaaccggggccaggcctgggccaagaacgtgggctgg
cgcctcgattaccagatcgcgacgccaggcatcgccgcacgcgcacgccgcgcatcggtc
tataaggaagcgcgcttttccgatcatgcgcccttgacggtggactacgacgacgcctga
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