Nitrogeniibacter mangrovi: G3580_02605
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Entry
G3580_02605 CDS
T06549
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
azq
Nitrogeniibacter mangrovi
Pathway
azq00300
Lysine biosynthesis
azq00470
D-Amino acid metabolism
azq01100
Metabolic pathways
azq01110
Biosynthesis of secondary metabolites
azq01120
Microbial metabolism in diverse environments
azq01230
Biosynthesis of amino acids
Module
azq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
azq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G3580_02605 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G3580_02605 (dapF)
Enzymes [BR:
azq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
G3580_02605 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QID16614
UniProt:
A0A6C1B322
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Position
575942..576775
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AA seq
277 aa
AA seq
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MRLPFSKMHGLGNDFVVLDATAAPIELTAERVRFLADRHFGVGCDQLLVVEPASRPDVDF
RYRIFNADGGEVEQCGNGARCFVRFVHDKGLTDKTAIRVETRSGIIEPRLEADGSVTVDM
GVPELEPARIPFDSGSDAVVQPLQVGDTMVPITAVSMGNPHAVQVVADVDAAPVATQGPA
IESHPRFPARVNAGFMEVVDAHTIRLRVYERGAGETLACGTGACAAVVAGVLRGLLESPV
RVHTRGGELSIAWQGRGTPVMMTGPAVRVFDAEIELD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttccgttttccaagatgcacggcctgggcaacgatttcgtggtcctcgacgcc
accgccgcgcccatcgagctgaccgccgagcgggtccgctttctcgccgaccgccatttc
ggcgtcggctgcgaccagctgctcgtggtcgagccggcctcgcgcccggacgtggatttc
cgctaccgcatcttcaatgcggacggcggcgaggtggagcagtgcggcaacggtgcgcgc
tgcttcgtgcgtttcgtgcacgacaaggggctcaccgacaagaccgcgatccgggtcgag
acccgttccggcatcatcgaaccgcgcctcgaggccgacggctcggtgaccgtcgacatg
ggcgtgcccgagctggagccggcgcgcatccccttcgactccggttccgacgccgtggtg
cagccgctgcaggtgggtgacaccatggtgcccatcaccgcggtgagcatgggcaatccg
catgcggtgcaggtggtggccgacgtggacgcggcgccggtggcgacccaggggccggcc
atcgagtcccatccgcgcttcccggcgcgggtcaatgccggcttcatggaagtggtcgac
gcccacaccatccgcctgcgggtgtacgagcgcggcgccggcgagacgctggcctgcggc
accggcgcctgtgccgccgtggtggcgggcgtcctgcgcggcctgctggagagcccggtg
cgggtgcacacccgcgggggcgagctgagcatcgcctggcaggggcggggcacgccggtc
atgatgaccgggcccgcggtgcgggtcttcgacgccgagatcgaactggactga
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