Nitrogeniibacter mangrovi: G3580_03475
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Entry
G3580_03475 CDS
T06549
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
azq
Nitrogeniibacter mangrovi
Pathway
azq00521
Streptomycin biosynthesis
azq00523
Polyketide sugar unit biosynthesis
azq00525
Acarbose and validamycin biosynthesis
azq00541
Biosynthesis of various nucleotide sugars
azq01055
Biosynthesis of vancomycin group antibiotics
azq01100
Metabolic pathways
azq01110
Biosynthesis of secondary metabolites
azq01250
Biosynthesis of nucleotide sugars
Module
azq_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
azq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G3580_03475 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G3580_03475 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
G3580_03475 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G3580_03475 (rfbB)
00525 Acarbose and validamycin biosynthesis
G3580_03475 (rfbB)
Enzymes [BR:
azq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
G3580_03475 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QID16776
UniProt:
A0A6C1AZJ1
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All DBs
Position
759190..760245
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AA seq
351 aa
AA seq
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MILVTGGAGFIGANFVLDWIAQVGEPVVNLDKLTYAGNLETLRSLSHDGRHVFVQGDICD
RGLVDALLAEHRPRAIVHFAAESHVDRSILGPAEFVRTNVEGTFTLLEAARAYWGALEGA
GKADFRFLHVSTDEVYGSLAADAPAFTETHPYEPNSPYSASKAASDHLVRAWYHTYGLPV
LTTNCSNNYGPYQFPEKLIPLMIVNALAGKALPIYGDGMNVRDWLYVKDHCSAIRTVLAR
GRLGETYNVGGWNEMANVDIVNTLCAILDELRPGTGSYADQITYVKDRPGHDRRYAIDAR
KIERELGWRPAETFETGIRKTVQWYLDNETWIANVQSGAYRDWVAANYADR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgattctcgtcaccggcggcgccgggttcatcggcgccaacttcgttctggactggatc
gcccaggtgggcgagccggtggtcaacctcgacaagctcacctatgcgggcaacctcgaa
accctcaggtcgctgtcgcacgacggtcgccatgtgttcgtccagggcgacatctgcgat
cgcggtttggtcgatgccctgctggccgagcaccggccccgggccatcgtgcatttcgcc
gccgaaagccatgtggaccgctccatcctcgggccggcggagttcgtgcgcaccaacgtg
gaaggcaccttcaccctgctggaagcggcacgtgcctattggggggcgctggagggcgca
gggaaggcggacttccgcttcctgcacgtgagcaccgatgaagtctatgggtcgctggcg
gccgacgccccggccttcaccgaaacccacccgtacgagcccaacagtccgtattcggcc
agcaaggcggccagcgaccatctggtgcgggcctggtatcacacctacgggctgccggtg
ctgaccaccaactgctcgaacaactacgggccctaccagtttccggaaaagctcatcccg
ctcatgatcgtcaatgcgctggcgggcaaggccctgccgatctacggggacggcatgaac
gtgcgcgactggctgtacgtgaaggaccactgcagtgccatccgcaccgtgctggcccgc
ggccggctcggcgagacctacaacgtgggcggctggaacgagatggccaacgtcgacatc
gtgaacaccctgtgcgccatcctcgacgagttgcgccccggcaccggcagctacgccgac
cagatcacctacgtgaaggaccgtcccggccacgaccggcgctacgccatcgatgcgcgc
aagatcgagcgcgaactgggctggcgtccggccgagaccttcgagaccggcatccgcaag
accgtgcagtggtatctggacaacgagacctggatcgccaacgttcagagcggcgcctac
cgcgactgggtggccgccaactacgccgaccgctga
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