Nitrogeniibacter mangrovi: G3580_12540
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Entry
G3580_12540 CDS
T06549
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
azq
Nitrogeniibacter mangrovi
Pathway
azq02020
Two-component system
azq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
azq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G3580_12540
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G3580_12540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azq03021
]
G3580_12540
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
azq02035
]
G3580_12540
Transcription machinery [BR:
azq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3580_12540
Bacterial motility proteins [BR:
azq02035
]
Flagellar system
Flagellar assembly proteins
Stator
G3580_12540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Alpha-E
Motif
Other DBs
NCBI-ProteinID:
QID18395
UniProt:
A0A6C1B6H9
LinkDB
All DBs
Position
complement(2716050..2716817)
Genome browser
AA seq
255 aa
AA seq
DB search
MYTASGTLDRDQLVTHYAPLVKRIAYHLMAKLPASVQVDDIIQNGMIGLLDAISRYEEGL
GAQFETYAVQRIRGAMLDGLRENDWLPRSLRRDMRRIEGAIHELEQRHGRPPTERELAGA
MDMELADYQKMLQDARGHQLVYFEDFTEDSDDDFLERHAAGHEGDPLDALLDQNMRDVLV
NAIDDLPEREKLVMGLYYEEDLNLREIGEVLGVSESRVCQLHSQAVARLRSRIHGTKGAP
KARRGRPPKHANKAA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtataccgcatccggcactcttgatcgggaccagctggtgacgcactacgcgccgctg
gtcaagcgcatcgcctaccacctgatggccaagctgccggccagcgtgcaagtcgatgac
atcatccagaacggcatgatcggcctgctcgacgccatcagtcgctacgaagaagggctg
ggcgcgcaattcgagacctatgcggtgcaacgcattcgcggcgccatgctcgacggcctg
cgcgagaacgactggctgccgcgcagcctgcgccgcgacatgcgtcgcatcgaaggcgcc
atccacgagctcgaacagcgccacggccgaccgcccacggagcgggaactggccggcgcc
atggacatggaactggcggactaccagaagatgttgcaggacgcccgcggtcaccagctg
gtctatttcgaagatttcaccgaggacagcgacgacgactttcttgagcgccacgccgcc
gggcacgagggcgatccgctcgatgcgctgctcgaccagaacatgcgcgatgtgctggtc
aacgccatcgacgatctgcccgagcgcgagaaactggtgatgggcctgtactacgaggaa
gacctcaacctgcgcgagatcggcgaggtgctcggggtgtccgaatcgcgcgtgtgccag
ctgcacagccaggccgtcgcgcggctgcgttcgcgtatccacgggaccaagggggcgccc
aaggcgcgccgcggccgcccgcccaagcatgccaacaaggccgcgtga
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