KEGG   Nitrogeniibacter mangrovi: G3580_17160
Entry
G3580_17160       CDS       T06549                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
azq  Nitrogeniibacter mangrovi
Brite
KEGG Orthology (KO) [BR:azq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:azq03032]
    G3580_17160
   03036 Chromosome and associated proteins [BR:azq03036]
    G3580_17160
   03400 DNA repair and recombination proteins [BR:azq03400]
    G3580_17160
DNA replication proteins [BR:azq03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    G3580_17160
Chromosome and associated proteins [BR:azq03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    G3580_17160
DNA repair and recombination proteins [BR:azq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      G3580_17160
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2267 HU-CCDC81_euk_2 PqqD HU-DNA_bdg
Other DBs
NCBI-ProteinID: QID19192
UniProt: A0A6C1B649
LinkDB
Position
complement(3702723..3703001)
AA seq 92 aa
MNKGEFVEALADRMDVSRAQADRAVSAVLDIITEELAKGGKVAFTGFGSFEVSKRAARTG
RNPQTGASIKIAASSVPKFSAGATLKSAVNGK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaaggtgaattcgtcgaagcgctggccgaccgtatggacgtctcccgtgcccag
gccgatcgtgccgtgtccgccgtgctggacatcatcactgaagaactggccaagggtggc
aaggtcgccttcaccggtttcggttccttcgaagtgtccaagcgtgccgctcgcaccggc
cgtaacccgcagaccggcgcttcgatcaagatcgcggcttccagcgtgcccaagttctcc
gctggcgcgacgctcaagtccgcggtcaacggcaagtaa

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