Azoarcus sp. DD4: CJ010_12345
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Entry
CJ010_12345 CDS
T06048
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
azr
Azoarcus sp. DD4
Pathway
azr00521
Streptomycin biosynthesis
azr00523
Polyketide sugar unit biosynthesis
azr00525
Acarbose and validamycin biosynthesis
azr00541
Biosynthesis of various nucleotide sugars
azr01055
Biosynthesis of vancomycin group antibiotics
azr01100
Metabolic pathways
azr01110
Biosynthesis of secondary metabolites
azr01250
Biosynthesis of nucleotide sugars
Module
azr_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
azr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CJ010_12345 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CJ010_12345 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CJ010_12345 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CJ010_12345 (rfbB)
00525 Acarbose and validamycin biosynthesis
CJ010_12345 (rfbB)
Enzymes [BR:
azr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CJ010_12345 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
QDF97262
UniProt:
A0A4Y6KTF3
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All DBs
Position
complement(2685848..2686927)
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AA seq
359 aa
AA seq
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MILVTGGAGFIGGNFVLDWIEELGEPVVNLDALTYAGNLETLASLAGDKRHIFERGDICD
RALVDRLLATHRPRAIVHFAAESHVDRSIHGPAEFIRTNVQGTFTLLEAARAYWNSLEGE
AKAAFRFHHVSTDEVYGSLGPDDAPFTETHAYEPNSPYSASKAASDHLVRAWYHTYGLPV
VTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPIYGDGQNVRDWLYVKDHCSAIRTVLAR
GRLGETYNIGGWNEKPNIEIVRTVCALLDELRPSPEGSYSRLITYVKDRPGHDRRYAIDA
RKVERELGWRPAETFESGIRKTIAWYLANPEWVANVQSGSYREWVSTNYGERDTTGERA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgattctcgtaaccggcggcgccggcttcatcggtggcaacttcgtactggactggata
gaggaactcggcgagccggtcgtaaacctcgacgcgctcacctacgcgggcaacctcgaa
accctggcgtcgctggccggagacaagcgccatatcttcgagcgcggcgacatctgcgac
cgcgcgctggtcgaccgcctgctcgcaacccatcgtccgcgggccatcgtccatttcgct
gccgaaagccatgtcgaccgctccatccacgggccggccgaattcatccgcaccaacgtg
caggggaccttcacgctgctggaagcggcacgcgcctactggaacagcctggagggcgag
gccaaggcggcattccgcttccaccacgtcagcaccgacgaggtctacggctcgctcggt
ccggacgacgctccattcaccgaaacgcacgcctatgagccgaacagtccgtattccgcc
agcaaggcggcctccgaccatctcgtgcgcgcctggtaccacacctacggtctgccggtg
gtcaccaccaactgctccaacaactacggcccctaccattttccggaaaagctgattccg
ctgatgatcgtaaacgccttggccggcaagcccctgccgatctacggcgacgggcagaac
gtgcgcgactggctgtacgtcaaggaccactgcagcgccatccgcaccgtgctggcgcgc
ggccgcctcggcgagacctacaacatcggtggctggaacgagaagcccaacatcgagatc
gtgcgcacggtgtgcgcactgctggacgagctccgcccctcgccggaaggcagctatagc
cgcctcatcacctacgtgaaggaccgccccggtcacgaccgccgctacgcgatcgacgca
cgcaaggtcgaacgcgaactcgggtggcgcccggcggagacgttcgagagcggcatccgc
aagaccatcgcctggtatctcgccaatccggaatgggtcgccaacgtccagagcggcagc
tatcgcgaatgggtatcgaccaactacggcgagcgcgacaccaccggggaacgggcatga
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