Azoarcus sp. DD4: CJ010_20500
Help
Entry
CJ010_20500 CDS
T06048
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
azr
Azoarcus sp. DD4
Pathway
azr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
azr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CJ010_20500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
azr02022
]
CJ010_20500
02035 Bacterial motility proteins [BR:
azr02035
]
CJ010_20500
Two-component system [BR:
azr02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CJ010_20500
Bacterial motility proteins [BR:
azr02035
]
Pilus system
Twitching motility proteins
CJ010_20500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_28
AAA_16
HTH_23
HTH_20
FleQ
HTH_29
HTH_30
Bac_DnaA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QDF98743
LinkDB
All DBs
Position
complement(4451826..4453205)
Genome browser
AA seq
459 aa
AA seq
DB search
MSQIERRTRPSSSEVLVVDDEEDIRELIALSLLRLGLACDTAGSVAEARALLDSRRYRLC
LTDMRLPDGDGLELVETIQARYPGLPVAVITAFGSIDTAIRALKLGAFDFVTKPVELKAL
RELVTHALRLDAKAEPAEASNGRRLIGSSAALAQLRVQIAKLARNQAPVFIHGESGTGKE
VIANLIHAQGARAGGPFVPVNCGAISPELMESEFFGHRKGSFTGANTDKEGLFQAANGGT
LFLDEVGELPLAMQVKLLRAIQERAVRPVGAHAEVTVDVRILSASHRDLAQLVAEGKFRQ
DLFFRINVITLRVPPLRERIEDIPELATHILRRLAEREGSAPRRLSAAAIARLQQYAFPG
NVRELENLLERACALCDGDEIGMDDIELYPTEGITQSQIAFDPNREPAADDCDDDGGDDE
RIRVLRALDETRWNRSAAARKLGMTLRQLRYRLQKWGME
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcgaacgccgtacccgccccagttcgagcgaagtgctggtggtggacgat
gaagaggacatccgcgaactgatcgcgctgtcgctgctcaggctggggctggcctgcgac
accgccggctcggtggccgaggcgagggcgctgctggacagccgccgctaccgcctgtgc
ctgaccgacatgcgtctgcccgacggcgacggcctcgaactcgtcgagaccatacaggca
cgctaccccggcctgccggtggcggtaatcaccgccttcggcagcatcgacaccgcgatc
cgcgcgctcaagctcggcgccttcgacttcgtcaccaaaccggtggagctgaaggccctg
cgcgaactcgtgacccacgcgctgcggctcgacgccaaggcggagccggccgaagcatcg
aacggccgccggctcatcggcagctcggcggcgctggcccagttgcgggtgcagatcgcc
aagctggcgcgcaaccaggcgccggtcttcatccacggcgaatccggcaccggcaaggaa
gtgatcgccaacctcattcacgcgcagggcgcgcgcgccggcggccctttcgtgccggtg
aattgcggcgcgatctcgccggagctgatggaaagcgaattcttcggccatcgcaagggc
agtttcaccggcgccaacaccgacaaggaaggcctcttccaggcggcgaacggcggcacg
ctcttcctggacgaagtgggcgaactgccgctcgccatgcaggtgaagctgctgcgcgcc
atccaggaaagggcggtgcgcccggtcggtgcccatgccgaggtcacggtcgacgtgcgc
atcctctcggcctcgcaccgcgacctcgcccaactcgtggccgaaggcaagttccgccag
gatctgttcttccgcatcaacgtcatcaccctgcgggtgccgccgctgcgcgaacgcatc
gaggacattcccgagctcgccacccacatcctgcgccgcctggccgaacgcgagggcagt
gcgccacggcggctgtcggccgcggccatcgcccgcctgcagcaatatgccttccccggc
aacgtgcgcgagctcgaaaacctgctggagcgcgcctgcgcgctgtgcgacggggatgag
atcggcatggacgacatcgagctctatcccaccgaaggcatcacccagtcgcagatcgcg
ttcgacccgaaccgggagcccgcagcggacgattgcgacgatgacggcggcgacgacgag
cgcatccgcgtcctgcgggcgctggacgaaacccgctggaaccgctcggcggcggcgcgc
aagctgggcatgacgctgcggcaactgcgctaccgcctgcagaagtggggcatggaatga
DBGET
integrated database retrieval system
