KEGG   Azoarcus sp. DD4: CJ010_20670
Entry
CJ010_20670       CDS       T06048                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
azr  Azoarcus sp. DD4
Pathway
azr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:azr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CJ010_20670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:azr03400]
    CJ010_20670
DNA repair and recombination proteins [BR:azr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CJ010_20670
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CJ010_20670
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_23 DnaJ_CXXCXGXG RsgA_GTPase AAA_22 AAA_21 BCA_ABC_TP_C AAA_18 nSTAND3 Viral_helicase1 cobW AAA_25 NACHT T2SSE DUF3987
Other DBs
NCBI-ProteinID: QDF98777
UniProt: A0A4Y6KX14
LinkDB
Position
4485404..4488229
AA seq 941 aa
MDEIRIRGARTHNLKNISLDLPRNRLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPHC
PDHPAHALEAQSVSQMVDHVLALPEETRLMILAPVVSGRKGEQQDLFADLRAQGFVRVRV
DGVVMELDAMAPLEKGRRHDVQVVIDRLKVRADLRGRLAESFETALTHADGRAIAVEMDG
GTEHLFSARFACPVCSFALAELEPRLFSFNNPAGACPKCDGLGKIDFFDPERVVAHPHLS
LAAGAIRGWDRRNQFYFQMLASLADHYGFDLESAFEQLPEAVRATVLHGSGREKIAFRYL
ADNGRTVLKEHPFEGIIPNLERRYKETDSLAVREELSKYRATRACPACEGSRLRSEARHV
LIGDRNLTDISRLPLGACRSFFENLQLSGQRAQIADKIVKEIADRLSFLINVGLDYLSLD
RSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLCKLRDLGNTV
IVVEHDEDAIRAADYLVDMGPGAGEHGGHVIACGTPAEVFADEASITGAYLAGRKQIAIP
AERIAPSPERLLRLRGARGNNLRNVTLELPVGLFICVTGVSGSGKSTLINETLAPIAARQ
LHGAAAEPAPYDSIEGLDAFDKVINVDQSPIGRTPRSNPATYTGLLTPIRELFAGVPEAR
ARGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDMYVPCDICHGRRYNRETLEIRYKG
RSIYEVLEMTVEQAFDFFRPVPAIARKLETLIDVGLGYIRLGQSATTLSGGEAQRVKLAL
ELSKRDTGRTLYILDEPTTGLHFQDIELLLTVLHRLREHGNTVVVIEHNLDVIKTADWIV
DLGPEGGGGGGTVVCAGTPEAIAAHPGSHTGRYLGAMLGVR
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggacgaaatccgcattcgcggcgcgcgcacccacaatctgaagaacatcagcctggat
ctgccgcgcaaccggctgaccgtcatcaccggtttgtcaggctcgggcaaatcctcgctg
gccttcgacacgctgtacgccgagggacagcgacgctacgtcgaatccttgtcggcctac
gcccggcagttcctgcaactgatggaaaagcccgacgtcgatctgatcgagggactgtcg
cctgcaatctcgatagagcagaaggcgaccagccacaatccgcgctccaccgtcggcacc
gtcaccgaaatccacgattacctgcgcctgctgtatgcgcgcgccggcacaccgcattgc
cccgatcatccggcccacgccctggaagcccagagcgtgtcacagatggtggaccatgtg
ctcgcactgcccgaagagacgcggctgatgatcctcgccccggtggtgagcggccgcaag
ggcgagcagcaggatctctttgcggacttgcgggcacagggctttgtccgcgtgcgggta
gacggtgtcgtcatggaactggacgcgatggcgccgctcgagaaggggcgtcgtcacgac
gtgcaggtggtgatagaccggctgaaggtacgcgccgacctgcgcggcagactggccgaa
tccttcgagaccgcgctgacccatgccgacggtcgcgctatcgcggtcgagatggacggc
ggtaccgagcacctcttttccgcccgcttcgcctgcccggtatgcagcttcgcgctcgca
gaactggaaccgcgactgttctccttcaacaaccccgccggggcgtgccccaagtgcgac
ggactcggcaagatcgacttcttcgacccggaaagggtggtcgcacacccgcatctgtca
ctcgcggccggcgcaatccgtggctgggatcgtcgcaaccagttctatttccagatgctg
gccagcctcgccgatcattatggtttcgacttggagtccgctttcgagcagctgcctgaa
gcggtccgcgcgacggtgctgcacggctccggacgagagaagatcgcattccgctatctg
gcggacaacggcaggacggtacttaaagagcatcccttcgaaggcatcattcccaacctc
gagcggcgctacaaggagaccgactcgctggcagtacgcgaagagctcagcaagtaccgc
gcaacccgtgcctgccccgcctgcgagggcagccgcctgcgcagcgaagcgcgccacgtg
ctgatcggcgaccgcaacctgaccgacatcagtcgcttgccgctgggcgcatgcagatcc
ttctttgaaaacctgcagctcagcggccagcgcgcccagattgccgacaagatcgtcaag
gagatcgccgaccgcctgagcttcctcatcaacgtcgggctcgactacctctcgctcgac
cgttcggccgacaccctgtccggcggcgaagcccagcgcatccgcctggccagccagatc
ggctccgggctcaccggcgtcatgtacgtcctcgacgaaccgtcgatcggcctccatcag
cgcgacaacgaccgactgctcgccaccctgtgcaagctgcgggatcttggcaataccgtc
atcgtggtcgagcacgacgaggacgccatccgtgctgccgactatctggtggacatgggg
ccgggcgccggcgagcacggcgggcatgtcatcgcctgcggtactccggccgaggtattt
gccgacgaagcttccattaccggcgcctatctcgccggacggaagcagatcgcgatccct
gcggagcgcattgcgccctctccggaacgcctgctacggctccgaggcgcgcgcggcaac
aacttgcgcaacgtcacgctggagttgccggtcggactgttcatctgcgttaccggcgtt
tccgggtcaggcaagtctacgctcatcaacgagaccctcgcgccgatcgcagcacgccaa
ctgcatggcgccgccgccgagcctgcgccttacgacagcatcgaggggctggacgccttc
gacaaggtcatcaacgtcgaccagtccccgatcggccgcacgccccgctccaatccagca
acctacaccggcctgctcacccccatccgggagctcttcgccggcgtgcccgaggcgcgg
gcgcggggttacggccccggccgcttctccttcaacgtcaagggcggccgctgcgaagcc
tgccagggcgatggcctgatcaaggtcgagatgcatttcctgccggacatgtacgtcccc
tgcgacatctgccacggccgcagatataaccgagaaacgctggagatccgctacaagggc
cgcagcatctacgaggtgctggaaatgacggtcgagcaggccttcgacttcttccggccg
gtgccggcgattgcccgcaagctcgaaaccctgatcgacgtcggcctcggctacatccgg
ctaggccagagcgcgacaacgttgtccggcggggaagcccagcgtgtcaagctggcactc
gaactgtcaaagcgcgataccgggcgcacgctctatatcctcgacgaaccgaccaccggc
ctgcatttccaggatatcgaactgttgcttaccgtgcttcatcgcctgcgggagcacggc
aataccgtggtcgtcatcgagcacaatctggacgtgatcaagacggccgactggatcgtc
gacctcgggccggagggcggtggtggtggcggtacggtggtgtgtgccggcactccggaa
gcgatagccgcccatcccggcagccataccggacgatacctcggtgcgatgctcggcgta
cgctga

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