Azoarcus sp. DD4: CJ010_21580
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Entry
CJ010_21580 CDS
T06048
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
azr
Azoarcus sp. DD4
Pathway
azr00541
Biosynthesis of various nucleotide sugars
azr01100
Metabolic pathways
azr01250
Biosynthesis of nucleotide sugars
Module
azr_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
azr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CJ010_21580 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
azr01005
]
CJ010_21580 (rfaD)
Enzymes [BR:
azr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CJ010_21580 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
azr01005
]
Core region
CJ010_21580 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
QDF98941
UniProt:
A0A4Y6KX21
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All DBs
Position
4673176..4674159
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AA seq
327 aa
AA seq
DB search
MIIVTGGAGFIGSNIVQGLNARGITDILVVDDLRDGRKCLNLADADIRDYMDMDDFLLRL
QAGEDFGKVDAVFHEGACSSTTEWDGRFVMRVNYEYTKALLAWCVARKVPLIYASSASVY
GMGPVFREAREFEQPLNMYAYSKFLFDCHLRAQQGIDSQVVGLRYFNVYGPREQHKGSMA
SVAFHFNNQLHESGRVRLFEGSDGYGPGEQRRDFIHVDDIVAVNLWLMDNPQVSGIFNLG
TGRAQSFNDVARAAIKWFRAQGDDATRERGGIDYIPFPDHLKGRYQSFTEADMSALRAAG
YDRPFMDVETGVPAYLGWLAGRGQDKR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgccggcttcatcggcagcaacatcgtgcaggggctcaac
gcccgcggcatcaccgacatcctggtggtcgacgacctgcgcgacggccgcaaatgcctc
aacctggccgatgccgacatccgcgactacatggacatggacgactttctcctccgcctc
caggctggcgaggatttcggcaaggtcgacgcggtgttccacgaaggcgcctgctcctcc
accaccgagtgggacggccgcttcgtgatgcgggtcaactacgagtacaccaaggccctg
ctggcctggtgcgtggcgcgcaaggtgccgctgatctacgcctcgtcggcctcggtgtac
ggcatgggcccggtcttccgcgaagcgcgcgagttcgagcagccgctcaacatgtacgcc
tattccaagttcctgttcgactgccatctgcgcgcccagcagggcatcgacagccaggtg
gtgggcctgcgctacttcaacgtctacggcccgcgcgaacagcacaagggctcgatggcg
agcgtcgccttccacttcaacaaccagctccacgaatccggccgggtgcggctgttcgaa
ggttccgacggctacggtccgggcgaacagcggcgcgacttcatccatgtcgacgacatc
gtcgcggtcaacctgtggctgatggacaacccgcaggtgtcgggcatcttcaacctcggc
accggccgcgcgcagagcttcaacgacgtcgcccgtgccgcgatcaagtggttccgcgcc
cagggcgacgatgccacccgcgagcgtggcggcatcgactacatccccttcccggaccac
ctcaagggacgctaccagagcttcaccgaagccgacatgagcgcgctgcgcgccgccggc
tacgaccgcccgttcatggacgtcgagaccggcgtgcccgcctatctcggctggctggcc
ggccgcggccaggacaagcgttga
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