Azoarcus sp. DD4: CJ010_24190
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Entry
CJ010_24190 CDS
T06048
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
azr
Azoarcus sp. DD4
Pathway
azr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJ010_24190 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azr03400
]
CJ010_24190 (recD)
Enzymes [BR:
azr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CJ010_24190 (recD)
DNA repair and recombination proteins [BR:
azr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJ010_24190 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
Helicase_RecD
RecD_N
AAA_22
UvrD-helicase
DEAD
MukB
AAA_16
SLFN-g3_helicase
nSTAND3
AAA_23
CbiA
AAA_28
AAA
T2SSE
UvrD_C
ATPase
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
QDF99891
UniProt:
A0A4Y6KZV2
LinkDB
All DBs
Position
complement(5218698..5220680)
Genome browser
AA seq
660 aa
AA seq
DB search
MRTPRGGAAELPPQLDLALGFAEHLQAWAQGLAAPAEALAALRHAGRQLALATSAGHVCL
PLAMLESDDGPMAPAEDLLPDWADDAMPAPGGLRARLLASGVVVEAAALAASARVAHPLV
LDAADRLYLRRHYDLEARLARALHDRAAPLPAVADDARLAAVLGPLFPAPPAAGRPDWQR
IAVALALQRRLTVISGGPGTGKTTTVAALLGALLGLQPGLRIALAAPTGKAAARMLEALR
GRAAGLPPALRAGLPDQAHTVHRLLGVTGEAGRFRHHAGNPLPVDVLVVDEASMLDLALA
ARLVDALPPEARLVLLGDKDQLAAVEAGAVFAELSASRRLVRADIERLAALTGCAADAMA
ASLAGDADHAGEANPLAGSVVWLTESHRFAADSGIGRLAADINAGRGEAALAWLRAGDDA
SACWLEDAGAKPGPALWQAMEAGYADYLAVLRAPEPRPGGRAEVRAEARVAAAFAAFDRF
RVLAAVHEGPRGLAALNAHLARWLRAELAHPLDRGAASKWYPGRPVIVLRNDYLLGLYNG
DIGLCLPDAEGALAVWFPLQGGGFRALPPQRLPAHDSAFALTVHKSQGSEFDAVLVVLPA
QSSRVLSRELLYTGVTRAAGRVMLAGDGAVFAAACARPTRRFSGLGARLRECAGAVVASP
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgccgcgcgggggcgcggccgaactgccgccgcagctcgatcttgcgcttggt
ttcgccgagcacctgcaagcctgggcgcaagggctcgcggcgccggccgaggcgctggcc
gccctgcgccacgccgggcgccagctcgcgctcgccacctcggccgggcacgtctgcctg
ccgctggcgatgctggaatccgacgacgggcccatggcaccggccgaagacctgctgccc
gactgggccgacgacgcgatgcccgcacccggcggcttgcgcgcacgcctgctggccagc
ggcgtggtggtggaagccgcggcgctggccgcgtctgcgcgggttgcgcatccgctggtg
ctggacgcggccgaccggctctacctgcgccgccattacgatctcgaagccaggctggcc
cgtgcgctgcatgaccgcgcggcgccgctgccggcggtggcggacgacgcccgcctcgcc
gcggtgctcggcccgctctttcccgcgccgcccgcggcgggccgccccgactggcagcgc
atcgccgtggccctggccctgcaacgccggctgacggtgatcagcggcggccccggcacc
ggcaagaccaccaccgtggccgcgctgctcggcgccctgctcggcctccagccggggctg
cgcatcgcgctcgccgcgcctaccggcaaggcggcggcgcgcatgctggaagcgctgcgc
ggccgcgccgccgggctgccgccggccctgcgtgccggcctgcccgaccaggcccacacg
gtgcaccgcctgctcggcgtcaccggcgaggccggccgcttccgccatcacgccggcaac
ccgctgccggtcgatgtgctggtggtggacgaggcttcgatgctggatctcgcgctcgcc
gcgcgtctggtcgacgccctgccgcccgaggcccggctggtgttgctgggcgacaaggac
cagctcgccgcggtggaggcgggcgcggtgttcgccgaactgtcggcctcgcggcggttg
gtgcgcgccgacatcgagcgtctcgccgcgctcaccggctgcgcggccgatgcgatggcg
gccagcctggccggcgacgccgaccatgccggcgaggccaatccgctcgccggcagcgtg
gtgtggctgaccgaaagccaccgttttgccgccgactccggcatcggccgcctcgccgcc
gacatcaacgccggccgcggcgaggcagcgctggcctggctgcgtgccggcgacgatgct
tccgcctgctggctggaggacgccggggcgaagccggggccggccctgtggcaggcgatg
gaggccggctatgccgactatctcgcggtgctgcgcgcgcccgagccgaggcccggcggc
cgcgccgaggtccgtgccgaggcgcgcgtcgccgcggccttcgccgccttcgaccgcttc
cgcgtgctggcggcggtgcacgaggggccgcgcggcctcgctgcgctcaacgcccatctg
gcgcgctggctgcgcgccgaactggcccatccgctcgaccgcggcgccgcctcgaagtgg
tatccggggcggccggtgatcgtgctgcgcaacgattacctgctcggcctctacaacggc
gacatcgggctgtgcctgcccgacgccgagggcgcgctggcggtgtggtttccgctgcag
ggcggcggtttccgcgccttgccgccgcagcgcctgccggcccacgacagcgccttcgcg
ctgacggtgcacaagagccagggctcggaattcgacgcggtgctggtggtgctgccggcg
cagtcttcccgggtgctgagccgcgagctgctctacaccggcgtcacccgcgcggccggc
cgcgtcatgctggccggcgacggcgcggtgtttgccgcggcctgcgcccggccgacacgg
cgtttttccgggctgggcgcgcgtctgcgcgaatgcgccggggccgtcgtcgcctcaccg
tga
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