Azoarcus sp. DD4: CJ010_24195
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Entry
CJ010_24195 CDS
T06048
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
azr
Azoarcus sp. DD4
Pathway
azr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJ010_24195 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azr03400
]
CJ010_24195 (recB)
Enzymes [BR:
azr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CJ010_24195 (recB)
DNA repair and recombination proteins [BR:
azr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJ010_24195 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDF99413
UniProt:
A0A4Y6KYF9
LinkDB
All DBs
Position
complement(5220689..5224402)
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AA seq
1237 aa
AA seq
DB search
MSATPAVAIEPLDVFACPLDGVRLVEASAGTGKTWNICGLYLRLLLEHDLAVESVLVVTF
TKAATAELSTRIRDRIVDCLRVLDGADPGGDPFVPGLIACVEAAGVGADVMAERLRRALQ
TFDEAAIFTIHGFCQRALADTPFAAGLPYALELAEDDSALRREVAQDFWRREIVGGAVSP
LLAELLIEYGDSPDAWAEHLGRDMGRPLAERRWDEADAADLAALQAALAAAYAEAVRHWQ
GGERACGAVMDALDVLNKTSYKPDAVSKARRQWQDWLGCADPRRPLPGDKDSKLRLLAAE
NLAGRTRKGSTPPADPFFAAADALLAARAAVDGALDAARLQLLRRFLEEGADELRRRKRE
RRQIAFDDILWNAYAALTAGEQPWLAAALHQRYPAALIDEFQDTDPLQFAIFDRVYNAEG
RHGRLFLVGDPKQAIYSFRSADLHTYLMARGRADARYTLARNQRSSPALIEACNRLFGAN
PAVFMLDGLDYQKVGAGERVRAPLADATDASAAALRLWRIPKDEALEAAAEESGEGGGHR
LPRAQALQRAALASAAEIARLLAAGAAGEIRIGERALAPADIAVLVRSHGQGARMRRALA
AFGVGSVELSQASVFHTEDAEELERVLIAIAEPARERRVMAALATAAMGRSAADLAALAA
DEAALLGVLDRFAHWRETWLARGFGVMLRRWMNDEGVAARLLARADGERRLTNLMHLAEL
LQQAAGTASPEVLLRLLATRRAGEGGGEAAQLRLESDRNLVQIVTIHRAKGLEYGIVFCP
FLFDGHPPREAGGPMRAWHDDHGTLVLDYRPAAAGDAAIGARIRAERMAEDLRLAYVALT
RAVYRCYLVVGCYAKLAFGKPGYSESGRSLLNWMVAGAGMDAAAWREHKMKPAEIDARWR
TLVAASGGNMVLSDLPDGSGVPLPSADSGELAPRVARPPQIPAGWRIGSFSALIFGASHE
QAARDHDARQLPVEADLATEPVQPPAADDILRFPRGPVAGDCLHAVFERIDFTDPAGWDA
AIDAALADHPQRGTSIERDGPRLKAMLRRMLADVLNTPLTGGSTPVALAGLPLARRLTEL
GFHLPAPQLGADALNAWLAAQGYHVPRLAFAELGGYLKGYVDLVFEHDGRYWVLDWKSNH
LGESPADYAPDRLEAAMQAHGYHLQHLLYTVALHRYLARCLPDYDYERHFGGVLYLFVRG
VRPDWQAEGIPAGVFHHRAGREVVTALDRLLAGEGAQ
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacgcctgccgtcgccatcgaaccgctggacgtcttcgcctgcccgctcgat
ggcgtgcgcttggtcgaggcctcggccggcaccggcaagacctggaacatctgcgggctc
tacctgcggctgctgctggagcacgatctggcggtggaatcggtgctggtggtcaccttc
accaaggccgccaccgccgagctgtccacccgcatccgcgaccgcatcgtcgattgcctg
cgggtgctcgacggcgccgatcccggcggcgatcccttcgtgcccggcctgatcgcctgc
gtcgaggcggccggcgtcggcgcggatgtcatggccgagcgtctgcgccgcgcgctgcag
accttcgacgaggcggcgatcttcaccatccacggcttctgccagcgcgcactcgccgac
acgcccttcgccgccggcctgccctatgcgctggagctggccgaggacgacagcgcgctg
cggcgtgaggtggcgcaggacttctggcggcgcgagatcgtcggcggcgcggtgtcgccg
ctgcttgccgagctgttgatcgaatacggcgacagccccgacgcctgggcggagcacctc
ggccgcgacatgggcaggccgctcgccgagcggcgctgggacgaggccgatgcggccgac
ctcgccgcgctgcaggcggcactggcggcggcctatgccgaagcggtgcgccactggcag
ggcggcgaacgggcttgcggcgcggtgatggatgcgctcgatgtcctcaacaagaccagc
tacaagccggacgcggtgagcaaggcccgccgccagtggcaggattggctgggctgcgcc
gacccgcgccggccgctgccgggcgacaaggacagcaagctcaggctgctcgcggcggaa
aacctcgccggccggaccaggaagggcagcacgccgccggccgaccccttcttcgccgct
gccgacgcgctgctcgccgcgcgcgcggcggtggacggcgcgctcgatgccgcccgcctg
cagctgctgcgccgcttcctggaggaaggcgcggacgagctgcggcgcaggaagcgcgag
cgccgccagatcgccttcgacgacatcctgtggaacgcctacgcggcgctgaccgccggc
gagcagccctggctcgccgcggccctgcaccagcgctacccggcggcgctgatcgacgag
ttccaggataccgacccgctgcagttcgccatcttcgaccgcgtctacaacgccgagggc
cgccacggccgcctcttcctggtgggcgacccgaagcaggccatctacagcttccgcagc
gccgacctgcacacctacctgatggcgcgtggccgcgccgatgcgcgctacaccctggcc
aggaaccagcgctcgtcgccggcgctgatcgaggcctgcaaccgcctgttcggcgccaat
ccggcggtgttcatgctggacgggctcgactaccagaaggtcggcgccggcgaacgggtg
cgcgcgccgcttgccgacgccaccgacgccagcgcggcggcgctgcggctgtggcgcatt
cccaaggacgaggcgctggaagccgccgccgaggaaagcggcgaaggcggcggccaccgc
ctgccgcgcgcccaggcgctgcagcgcgcggcgctggcgagcgcggccgagatcgcccgt
ctgctcgccgccggggcggcgggcgagatccgcatcggcgagcgcgcgctggcgccggcc
gacatcgcggtgctggtgcgcagccacggccagggcgcacgcatgcgccgcgcgctggcg
gccttcggcgtcggcagcgtcgagctgtcgcaggccagcgtgttccataccgaggacgcc
gaagagctggagcgggtgctgatcgccatcgccgagccggcgcgcgaacgccgggtgatg
gcggcgctggccaccgcggcgatgggccgcagcgccgccgatctcgccgcgctggccgcc
gacgaggcggccttgctcggcgtgctcgaccgcttcgcccactggcgcgaaacctggctg
gcacgcggcttcggcgtgatgctgcggcgctggatgaacgacgagggcgtggctgcgcgc
ctgctcgcccgggccgacggcgagcgccggctgaccaatctgatgcatctggccgaactg
ctgcagcaggccgccggcaccgcctcgcccgaggtcctgctgcgcctcctcgccacccgc
cgcgccggggagggcggcggcgaggcggcgcagctgcggctggaatccgaccgcaacctg
gtgcagatcgtcaccatccaccgcgccaagggcctggaatacggcatcgttttctgcccc
ttcctgttcgacggccatccgccgcgcgaggccggcggcccgatgcgcgcctggcacgac
gaccacggcacgctggtgctggactaccggcccgcggccgccggcgacgccgccatcggc
gcccgtatccgcgccgagcgcatggccgaggatctgcggctggcctacgttgcgctgacc
cgcgccgtctatcgctgctacctggtggtgggctgttacgccaagctcgccttcggcaag
ccgggctacagcgaaagcggccgcagcctgctcaactggatggtggccggcgctggcatg
gacgcggcggcctggcgcgagcacaagatgaagccggccgagatcgacgcgcgctggcgc
accctggtggcggcgagcggcggcaacatggtcctgtccgacctgcccgatggcagcggt
gtgccgctgccatcggccgacagcggcgagcttgcgccgcgcgtcgcccgtccgccgcag
atcccggcgggctggcgcatcgggagcttttcggcgctgatcttcggcgccagccacgag
caggcggcgcgcgaccacgacgcccgccagttgccggtcgaggccgaccttgccaccgag
ccggtgcagccgccggcggccgacgacatcctgcgctttccgcgcggtccggtggcgggc
gactgcctgcacgcggtgttcgagcgcatcgacttcaccgaccccgccggctgggacgcc
gccatcgatgccgcgctcgccgaccatccgcagcgcggcaccagcatcgaacgcgacggc
ccgcggctgaaggcgatgctgcgccgcatgctggccgacgtgctcaacaccccgctcacc
ggcggcagcacgccggtggcgctggccgggctgccgctggcgcgccggctcaccgaactc
ggcttccacctgccggccccgcagctcggcgccgatgcgctcaacgcctggctcgccgcc
cagggctatcacgtgccgcggctggccttcgccgaactcggcggctatctcaagggttac
gtcgacctggtgttcgaacacgacggccgctactgggtgctggactggaagtccaaccac
ctcggcgagtcgccggccgactacgcgccggaccggctcgaggcggcgatgcaggcgcat
ggttaccacctgcagcacctgctctacaccgtggcgctacaccgctacctggcgcgctgc
ctgcccgattacgactacgagcgccatttcggcggcgtgctctacctcttcgtgcgcggc
gtgcggccggactggcaggccgagggcataccggccggcgtcttccaccatcgcgccggc
cgtgaagtggtgacggcgctggaccgcctgctcgccggggagggcgcgcaatga
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