Azospirillum sp. TSH100: E6C72_00550
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Entry
E6C72_00550 CDS
T09516
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
azs03009
]
E6C72_00550
Enzymes [BR:
azs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
E6C72_00550
Ribosome biogenesis [BR:
azs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E6C72_00550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RNF216_N
Motif
Other DBs
NCBI-ProteinID:
QCG86354
LinkDB
All DBs
Position
1:complement(117483..118535)
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AA seq
350 aa
AA seq
DB search
MTDSPDTADNASTEAKGDSKVETRIVTADEADMRLDRWFKRHFPDVNHSYLQKLLRTGQV
RIDGKRAETSSRLAAGQGVRIPPLAAWAAPVKGPNQGPGKPKGMSDKQIAELQALVLYRD
ADVIAINKPAGLAVQGGTGTSKHLDAMLDALRFDGKERPKLVHRLDKDTSGVLLLARTTF
AASKLTELFRGSAVRKIYWAVTVGVPTPYQGKIDLALAKEGGPHGERVAENKEEGKRAVT
VYSVQENVGKQAAFVAMWPLTGRTHQLRVHMAAVGTPILGDGKYAGQGAFLAGAEVAKKL
HLHARRLILPHPRGGKTIDVTAPLPDHMQATWKYFGFSPNLRDDPFEDFE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgactgactctcccgataccgccgacaacgcttcgaccgaagccaagggcgacagcaag
gttgaaacccgcatcgtgacggccgacgaggccgacatgcggctcgaccgctggttcaaa
cggcatttccccgacgtgaaccacagctacctgcagaagctgctgcgcaccggtcaggtc
cgcatcgacggcaagcgggcggagacgtcgtcgcggctggcggcggggcagggcgtgcgc
atcccgccgctggccgcctgggccgccccggtcaaggggccgaaccagggaccgggcaag
cccaagggcatgtcggacaagcagatcgcagagctgcaggcgctggtgctctaccgcgac
gccgacgtgatcgccatcaacaagccggccggtctggcggtgcagggcggcaccggcacc
tccaagcatctcgacgccatgctggacgccctgcgcttcgacggcaaggaacggccgaag
ctggtccaccggctggacaaggacacctcgggcgtcctgctgctggcccgcaccacattc
gccgcgagcaagctgaccgagctgttccgcggcagtgccgtgcggaagatctattgggca
gtcaccgtcggcgtgccgacgccctaccagggcaagatcgatctggcgctggcgaaggaa
ggcggcccgcatggcgagcgggtggcggagaacaaggaagagggtaagcgcgccgtcacc
gtctattcggtgcaggagaatgtcggcaagcaggcggccttcgtcgccatgtggccgctg
accggccgcacccaccagctgcgggtccacatggccgccgtcggaacgccgatcctgggc
gacggcaaatatgccgggcagggcgccttcctggccggggcggaggtggcgaagaagctg
cacctgcatgcccgccggctgatcctgccccacccgcgcggcggcaagaccatcgacgtg
acggcgccgttgcccgaccacatgcaggcgacctggaagtatttcggcttcagccccaac
ctgcgcgacgacccgttcgaggatttcgagtga
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