Azospirillum sp. TSH100: E6C72_01135
Help
Entry
E6C72_01135 CDS
T09516
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
azs
Azospirillum sp. TSH100
Pathway
azs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E6C72_01135 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
azs03000
]
E6C72_01135 (nifA)
Transcription factors [BR:
azs03000
]
Prokaryotic type
Helix-turn-helix
Other families
E6C72_01135 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_2
AAA_5
GAF_3
AAA
Mg_chelatase
AAA_16
bpMoxR
AAA_3
UPF0175
HTH_23
AAA_22
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QCG86457
UniProt:
A0A4P7YG84
LinkDB
All DBs
Position
1:226859..228742
Genome browser
AA seq
627 aa
AA seq
DB search
MPSAAQSASSSSLELLTIYEVSKILGSSLDLEQTLREVLRALSYQLQMHRGRVYLQGEDG
ALRLVAAQGLPKDSPAQEIDYNQGEGISGRILKTGMPAVVPNLAEEPLFNNRSGGRDDLD
EQVASLVGVPIKAAGTVIGVLTIDRISDDGPSGHFGSDVRFLTMVANLIGQTVRLHRTVA
EERRFMMRETFRVQKELRPVVAPVNDVVCTSPNMVDVLAQVHRVAPFKSTVLIRGESGTG
KELIARAIHNLSPRKDAPFIRVNCAALPEALLESELFGHEKGSFTGAQKDHKGRFELASG
GTLFLDEIGDISSNFQAKLLRVLQEQEFERVGGSKTIKTDVRLICATNLNLEEAVGHGKF
RADLYFRINVVTIHLPPLRERRGDIAMLAKHFVGKFGRDNGLNLDIAPEALEVLNRCTWP
GNVRELENCIERAATQCRNGTIHVPDLSCSMNLCNSSVLFQYRTMGAAVGGLAPSMSGAV
TNPAQGRAQPSAVPPTMPPAMPAPHNGTANGAQWPACASGCSAGPAPACGASKPLPPSAI
LPLPNPLPTASSAPVPSAPAPQPALNPASAGPDLPLDEPESGPLRDRLVWAMERTGWVQA
KAARLLGMTTRQVSYALRKYNIEIKRF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtgctgcccagtccgcgtcctcctccagcctggaactgctgacgatctacgag
gtcagcaagatcctcgggtcgtcgctggacctggagcagacccttcgcgaggtgctgcgg
gcactgtcctaccaattgcagatgcatcgcggccgggtctacctccagggtgaggacggg
gccttgcggctcgtcgccgcgcaggggctgccgaaggactcgccggcgcaggagatcgac
tacaaccagggcgaaggcatcagcgggcgcatcctgaagaccggcatgccggccgtcgtg
cccaatctggccgaagagccgctgttcaacaaccgctccggcgggcgcgacgatctcgac
gaacaggtggcctcgctggtcggcgtgccgatcaaggcggccggcaccgtcatcggcgtg
ctgaccatcgaccgcatctccgacgacggccccagcggccatttcggctccgacgtccgt
ttcctgaccatggtcgccaacctgatcggccagaccgtgcgcctgcaccggacagtggcg
gaggagcggcgcttcatgatgcgcgagaccttccgcgtccagaaggagctgcggccggtg
gtggcgccggtcaacgacgtggtctgcaccagccccaacatggtcgacgtgctggcccag
gtccaccgggtggcgcccttcaagtcgaccgtgctgatccgcggcgagagcggcaccggc
aaggagcttatcgcgcgtgccatccacaacctttcgccgcgcaaggacgcccccttcatc
cgcgtcaactgcgccgccctgcccgaagcgcttctggaatcggagctgttcggccacgag
aaggggtccttcaccggcgcgcagaaggatcataagggccggttcgaactggcgtcgggc
ggcacgctgttcctcgacgagatcggcgacatctcctccaacttccaggccaagctgctg
cgcgtgttgcaggagcaggagttcgagcgggtcggcgggtcgaagacgatcaagaccgac
gtgcggctgatctgcgcaaccaacctgaaccttgaggaggcggtcggtcacggcaaattc
cgcgccgacctgtatttccgcatcaacgtggtgacgatccacctgccgccgctgcgcgaa
cggcgcggcgacatcgccatgctggccaagcatttcgtcggcaagttcggccgcgacaat
ggcctgaacctcgatatcgcgccggaagccctggaggtgctgaaccgctgcacctggccc
ggcaacgtgcgcgaactggaaaactgcatcgagcgcgcggcgacccaatgccgcaacggc
accatccatgtgcccgacctgtcctgcagcatgaacctgtgcaactcttcggtgctgttc
cagtaccgcaccatgggcgccgccgtcggcgggttggctccatcgatgagcggcgccgtg
accaacccggcgcagggccgcgcacagccgtccgcggtcccacccaccatgccgccagcc
atgccggcaccgcacaacggaacggcgaacggggcacaatggccggcctgcgcgtcgggc
tgttccgccggaccggcgccggcctgtggcgcttccaaaccgctgccgccctcggccatc
ctccctctgcccaaccctctgccgacggcatcctcggcacccgtcccctccgctccggcc
ccgcaaccggccctgaatccggcatcggccggtccggacctgcccttggacgagccggag
tcggggccgctgcgcgaccggctggtctgggcgatggagcgcaccggctgggtgcaggca
aaggccgcccggctgctgggcatgacgacgcgtcaggtgagctacgcgctgcgcaagtac
aacatcgaaatcaaaaggttctaa
DBGET
integrated database retrieval system
