Azospirillum sp. TSH100: E6C72_01230
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Entry
E6C72_01230 CDS
T09516
Name
(GenBank) PAS domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
azs
Azospirillum sp. TSH100
Pathway
azs03030
DNA replication
azs03430
Mismatch repair
azs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E6C72_01230
03430 Mismatch repair
E6C72_01230
03440 Homologous recombination
E6C72_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azs03032
]
E6C72_01230
03400 DNA repair and recombination proteins [BR:
azs03400
]
E6C72_01230
Enzymes [BR:
azs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E6C72_01230
DNA replication proteins [BR:
azs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E6C72_01230
DNA repair and recombination proteins [BR:
azs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E6C72_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS
DEDDh_C
DNA_pol_A_exo1
PAS_4
Rv2179c-like
PAS_8
PAS_9
Motif
Other DBs
NCBI-ProteinID:
QCG88538
LinkDB
All DBs
Position
1:242896..244971
Genome browser
AA seq
691 aa
AA seq
DB search
MAVRGSDASDPLLTYAVVMTAACAAAVWGLWLAVDRYLLRAAETLSREAGLIAHGNAEGA
VGGRVPLARYGDLLPIARAVNELSDKLAQVRRDIARTVAESTAKAEEQKTRLAAVLRDLH
EGVLVCNTRHQILLYNQTALDILHLTGELGLGRSLLHFVVAEPVTHTLERLTLRVREGRH
LTHEHGTTAQFVGATTDGRILLEGRMSAILQDPDPASDEPPTITGYVLTLSDATSELAAL
GQRDALLREATEGFRAPIANLRAAVETLYDAPDLGPGDRAAFESAMLDSCSSLSQRLEQV
TTAYRNVVTGSWPMSDIHSNNLITLVAHRVGAESAATVTLTGLPQWVHGDSHSLVLLFAY
LIGRVQALTGATAFDLEAAGPQDGDRWVYLDLVWQGPAVPSATVDSWLDRTLPDGLGGLS
ASDVLQHHRSTAWSEPLPTDDGAGRARLRVPLPPAQSSRTAQPRPKAGARPEFFDFGLLH
QPLATSELGRTPLDRLHYVVFDTETTGLSPSTGDEIIQIAAVRVVGGRILTGETFNTLVD
PRRPIPAESVPFHGITDGMVTGKPTIDAVLPQFRSFVSGAVLVAHNAAFDLKFLKMKERT
AGVAFDCPVLDTMLLSRMLLGNDGDHTLDGIAERLGIEVVDRHTALGDSLVTAAVFLRMI
EMLRERDVRTLDDAIRGANILVELAARERAF
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtgcgcgggtccgatgcgtcggacccgctgctgacctacgccgtggtgatgacg
gccgcctgcgccgcggcggtatgggggctatggctggcggtcgaccgctatctgctgcgc
gccgccgagacgctgagccgcgaagccggtctgatcgcccacggcaatgcggaaggtgcg
gtcggcggccgggtgccgctggcccgctatggcgacctgctgccgatcgcccgcgcagtg
aacgagctgtctgacaagcttgcccaggttcgccgcgacatcgcccgcaccgttgccgag
tccaccgccaaggcggaagagcagaagacgcggctcgccgccgtgctgcgcgacctgcat
gaaggcgtcctggtctgcaataccaggcaccagatcctgctctacaaccagaccgccctc
gacatcctccacctgaccggagagcttgggctgggccgctcgctgctgcatttcgtggtg
gcggagccggtgacccacacgctggaacggctgaccctgcgggtgcgcgaaggccgccac
ctcacccacgaacacggcaccaccgcccagttcgtcggcgccaccaccgacggccgcatc
ctgctggaaggccggatgagcgccatcctgcaagatcccgaccccgcgtcggacgagccg
cccaccatcaccggatatgtgctgaccctgtccgacgccaccagcgagttggcggcattg
gggcagcgcgacgccctgttgcgcgaggcgacggagggcttccgcgctccgatcgccaac
ctgcgcgcggcggtggagacgctgtacgacgcgcccgacctgggccccggcgaccgagcc
gcttttgagagcgcgatgctggactcctgctcaagcctgtcgcaaaggctggaacaggtc
acaaccgcctaccgcaacgtcgtcaccggcagctggccgatgagcgacatccactccaac
aacctgatcactctcgtcgcccaccgggtgggagccgagtccgcggcaacggtgacgctg
accggcctgccgcaatgggtgcatggtgacagccacagtcttgtcctgctgttcgcttac
ctgatcgggcgggttcaggcgctgaccggcgccaccgccttcgatctggaggcggccggg
ccgcaggatggtgatcgctgggtctatctcgacctcgtctggcaggggcccgcagtgccc
agcgccacggtggacagctggctggaccggaccctgcccgacggactgggcgggctcagc
gccagcgacgtgctccagcaccatcgcagcaccgcctggagcgaaccgctgcccacggac
gacggcgccggacgcgcccggctgcgcgtgccgttgccgccggcgcaatcgtcgcgcacc
gcccagccgcgaccgaaggccggcgcccggccggaattcttcgatttcgggctgctgcac
cagccactggcgaccagcgagcttggccgcacgccgctggaccggctgcattacgtggtg
ttcgacaccgagaccaccggcctgtcgcccagcaccggcgacgagatcatccagatcgcc
gcggtccgtgtggtgggtgggcgcatcctcacgggcgagaccttcaacacgctggtcgac
ccccgcaggccgatcccggcggagtcggtccccttccacggcatcaccgatggcatggtg
acgggcaagccgaccatcgacgccgtgctgccgcaattccgcagcttcgtctccggcgcg
gtgctggtggcgcacaacgccgccttcgatctgaaattcctgaagatgaaggaacggacg
gcgggggtggcgttcgactgtccggtgctcgacaccatgctgctgtcgcgcatgctgctg
ggcaatgacggcgaccacacgctggacggcatcgccgagcggctgggcatcgaggtggtc
gatcggcacacggcgctgggcgacagccttgtgaccgccgcggtgttcctgcggatgatc
gagatgctgcgcgagcgcgacgtgcggacgctggacgacgccatccgcggcgccaacatc
ctggtcgaactggcagcccgggaacgcgccttttga
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