Azospirillum sp. TSH100: E6C72_05075
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Entry
E6C72_05075 CDS
T09516
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azs03400
]
E6C72_05075 (addA)
Enzymes [BR:
azs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E6C72_05075 (addA)
DNA repair and recombination proteins [BR:
azs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
E6C72_05075 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QCG87161
LinkDB
All DBs
Position
1:complement(1052765..1056289)
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AA seq
1174 aa
AA seq
DB search
MTMTDLSTRSLPLDPNVAQRRASDPTASVWVGASAGSGKTKVLTDRVLRLMLSGTPPARI
LCLTFTKAAAAEMAIRINRTLGLWATLPDDALEDRLADLCGERPSMEARLNARRLFAQVV
DCPGGMKIQTIHAFCQSLLRRFPLEAELAPHFDVMDDRTADGLLTEARDAVLHAGRTEPD
SPLGRAMGRLTGELNAEDFAGLLAELAGQRGQVEKLFERFHGLDGLIDAIHDTLKVPPGV
TEETILAHACHDDQCEPPALREACRALSGGSASDQERGIAIQQWLDAADRRVRAFEAYKR
LFLTAEGSPRKTLMTKKPATAYPQALLSLQKEAERLVEISGRVKAAGVAASTTALLTLAQ
AMLDAYRERKAARALLDYDDLILAANRLLSGGDGKAPRVPWVLYKLDGGLDHILIDEAQD
TNPDQWAIVASLAGEFFVELEAAAPDGKIRTVFAVGDEKQSIFSFQRADPAEFARMRRHF
QEKAESAQRTWAGVDLDISFRSTSAVLETVDAVFALDHARDGVASDASPVIRHRAFRRGQ
AGLVELWPPVKPAEAVETPAWAPPVARESADSPSARLASVIAATVHRWIDSGETLEAKGR
PVRPGDVMVLVRRRTAFVTELVRALKDRGVPVAGVDRMVLTEQLAVMDLVALSDFLLLPD
DDLTLATVLKGPLVGLSEEALFRVAHGRRGTLWRSLVALAETEPEFRPARRYLGDLLART
DFSAPYELFAGLLNRPCPADDRSGRRAILKRLGPDAQDPLEEFLAVCLAFEKTEPPSLQN
FLAWLAASDAEIKRELEQGGGTVRIMTVHGSKGLQAPIVFLPDTLGSPTQSPPILWPDDD
CPVPLFAARRSQEDGLCAEARARANRRRDQEYRRLLYVALTRAEDRLYICGHQGKREPSD
ECWYRLVEEAMRDNGVPHPFDFTGLCPDGWAGEGWRLVGAQTAVVPRHVEEEESTATEPP
PPWIAEPPPGEPEPSRPLTPSRPDGEEPAVRSPLGTDDGQRFRRGLLVHRLLQTLPNLAE
AAREAACRRFLARPAHKLTPEQQDAIARETLAVLSHAEFAHLFGPDSRAEVPLVGVVALG
DGSRALAGRIDRLALAGDTVWIVDYKTNRPPPRDLEDVPMVYRRQMVAYREALRAVYPGR
RVRCVLLWTDGPYTMELPPSVLDAAAAGLAPRVG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaccgatctgtccacccgcagcctgccgctcgatcccaacgtggcgcagcgg
cgggcgtccgatccgacggcgtcggtgtgggtcggcgcctccgccggctccggcaagacc
aaggtgctgaccgaccgggtgctgcggctgatgctgtcgggcacgccgccggcgcgcatc
ctctgcctgaccttcaccaaggccgccgcggcggagatggcgatccgcatcaaccggacg
ctcggcctgtgggccaccctgcccgacgatgcgctggaggaccggctggccgacctctgc
ggcgagcggccgtcgatggaggcgcggctgaacgcgcgccgcctgttcgcccaggtggtg
gactgccccggcggtatgaagatccagaccatccacgccttctgccagtcgctgctgcgc
cgcttcccgctggaagccgagctggcgccgcatttcgacgtgatggacgaccgcaccgcc
gacgggctgctgaccgaggcgcgcgacgccgtgctgcatgccggccggaccgagccggac
agcccgctcggccgcgccatgggccgcttgaccggcgaactgaatgccgaggatttcgcc
gggctgctggcggaactggccggccagcgcgggcaggtggagaagctgttcgagcgattc
cacgggctggacgggctgatcgacgccatccacgacacgctgaaggtgccgccgggcgtg
accgaggaaacgatcctcgcccacgcctgccacgacgaccagtgcgagccgccggccctg
cgcgaggcctgccgggcgctgtcgggcggcagtgccagcgaccaggaacgcggcatcgcc
atccagcagtggctggacgccgccgaccgccgggttcgcgccttcgaggcctacaagcgg
ctgttcctgaccgccgagggcagcccgcgcaagacgctgatgaccaagaagccggccacc
gcctatccgcaggcgctcttgtccctgcagaaggaggcggagcggctggtcgagatctcg
gggcgggtgaaggccgccggggtcgccgcctcgaccaccgcgctgctgacgctggcgcag
gcgatgctggacgcctaccgcgagcgcaaggcggcgcgcgccctgctggattacgacgat
ctgatcctggcggccaaccggctgctgagcggcggcgacggcaaagcgccgcgcgtgccg
tgggtgctctacaagctggacggcggcctcgaccatatcctgatcgacgaggcgcaggac
accaaccccgaccagtgggccatcgtcgcctcgctggcaggtgagttcttcgtcgagctg
gaagcggcggcgcccgacggcaagatccgcaccgtcttcgcggtgggcgacgagaagcag
tcgatcttcagcttccagcgcgccgatccggccgaattcgcccgcatgcgccgccatttc
caggaaaaggcggagtcggcgcaacggacatgggcgggggtcgacctcgacatctccttc
cgctcgacctcggcggtgctggagacggtggacgccgtcttcgcgctcgaccatgcccgc
gacggcgtggcgtcggacgccagcccggtcatccgccaccgtgccttccgccgcgggcag
gccggtctggtcgagctgtggccgccggtgaagccggccgaggcggtcgagacgccggcc
tgggcgccgccggtggcgcgcgagtccgccgattcgccgtcggcccgactcgcctcggtg
atcgccgcgacggtgcatcgctggatcgacagcggcgagacgctggaggccaagggccgg
ccggtgcggccgggcgacgtgatggtgctggtccgccgccgcaccgccttcgtcaccgag
ctggtccgcgcgctgaaggaccgcggcgtgccggtggccggcgtcgaccgcatggtgctg
accgaacagctcgccgtcatggatctggtggcgctgtccgacttcctgctgctgcccgac
gacgatctgacgctggccaccgtgctgaaggggccgctggtgggcttgagcgaggaggcg
ctgttccgcgtcgcccatggccggcgcggcacgctgtggcgttcgctggtggcgctggcg
gagaccgaaccggagttccgcccggcccggcgctatctcggcgacctgctggcgcgcacc
gacttctccgccccctacgagctgttcgccgggctgctgaaccggccctgccccgccgac
gataggtcggggcgccgcgcgatcctgaagcggcttggccccgacgcgcaggatccgctg
gaggagttcctggccgtctgcctcgccttcgagaagaccgagccgccgtccttgcagaac
ttcctcgcctggctggcggccagcgacgccgagatcaagcgcgagctggaacagggcggc
ggcaccgtgcggatcatgacggtccacggctccaaggggttgcaggcgcccatcgtcttc
ctgcccgacacgctgggcagcccgacccagagcccgccgatcctgtggccggacgacgac
tgcccggtgccgctgttcgccgcccgccggtcccaggaggacgggctgtgcgccgaagcg
cgggcacgggccaaccggcggcgcgaccaggaataccgccggctgctctatgtcgcgctg
acgcgggcggaggaccggctctacatctgcggccaccagggcaagcgcgagccgtccgac
gagtgctggtaccggctggtcgaggaggcgatgcgcgacaacggcgtgccgcaccccttc
gacttcaccggcctctgccccgacggctgggcgggagagggctggcggctggtcggcgcc
cagaccgccgtggtgccccgccatgtcgaggaggaggagagcaccgccaccgagccgccg
ccgccctggatcgccgagccgccgccgggcgagccggagccgtcgcgcccgctcacgcca
tcccggccggacggcgaggaaccggcggtgcgctcgccactgggcaccgatgacggccag
cgcttccgccgcggcttgctggtccaccggttgttgcagacgctgcccaaccttgccgag
gcggcgcgggaagccgcctgccgccgcttcctcgcccgcccggcgcacaagctgacgccg
gaacagcaggacgccatcgcgcgggagacgctggcggtgctgagccatgcggagttcgcg
catctgttcggcccggactcgcgggcggaggtgccgctggtcggcgtggtggcactgggc
gacggcagccgggcattggccggccgcatcgaccggctggcgctggccggcgatacggtg
tggatcgtcgactacaagaccaacaggccgccgccgcgggatctggaagacgtgccaatg
gtttaccggcgccagatggtggcctaccgcgaggcgttgcgcgcggtctatccggggcgg
cgggtgcgctgcgtgctgctgtggaccgacggcccctacaccatggagctgccgccgtcg
gtgctggacgcggcggctgccggactggcaccaagggttggatga
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