Azospirillum sp. TSH100: E6C72_09085
Help
Entry
E6C72_09085 CDS
T09516
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
azs
Azospirillum sp. TSH100
Pathway
azs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E6C72_09085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azs03021
]
E6C72_09085
03400 DNA repair and recombination proteins [BR:
azs03400
]
E6C72_09085
Enzymes [BR:
azs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E6C72_09085
Transcription machinery [BR:
azs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E6C72_09085
DNA repair and recombination proteins [BR:
azs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E6C72_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QCG87859
LinkDB
All DBs
Position
1:1913070..1913504
Genome browser
AA seq
144 aa
AA seq
DB search
MARVTVEDCVLKVPNRFELVMMAAQRAREVASGAPLSIDRDNDKNPVVALREIADETVSL
DYLKNALIKGHQKHVEPDEPEEEIVELMAGENDWAARGNNSLGDEDGMSESDGEELSEDD
DIAADMDAEPGAGFAMTEDPDGDL
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttaccgttgaagattgcgtcctgaaggttccgaaccgtttcgagctggtc
atgatggccgcccagcgcgcccgcgaagtcgcgagcggggctccgctgtcgattgatcgc
gacaacgacaagaacccggtcgtggcgctccgcgagattgcggacgagacggtgtcgctc
gactatctgaagaacgccctcatcaagggccaccagaagcatgtcgagccggatgagccc
gaggaagagatcgtcgagctgatggccggcgagaatgactgggccgcccgcggcaacaac
tcgctcggcgacgaagacggcatgagcgagagcgatggcgaagagctgagcgaagacgat
gacatcgccgccgacatggatgctgagccgggcgccggtttcgccatgaccgaggatccc
gacggagacctctga
DBGET
integrated database retrieval system
