Azospirillum sp. TSH100: E6C72_09115
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Entry
E6C72_09115 CDS
T09516
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E6C72_09115 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azs03019
]
E6C72_09115 (rnc)
03009 Ribosome biogenesis [BR:
azs03009
]
E6C72_09115 (rnc)
03036 Chromosome and associated proteins [BR:
azs03036
]
E6C72_09115 (rnc)
Enzymes [BR:
azs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
E6C72_09115 (rnc)
Messenger RNA biogenesis [BR:
azs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E6C72_09115 (rnc)
Ribosome biogenesis [BR:
azs03009
]
Eukaryotic type
90S particles
RNase
E6C72_09115 (rnc)
Prokaryotic type
rRNA processing factors
E6C72_09115 (rnc)
Chromosome and associated proteins [BR:
azs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
E6C72_09115 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
QCG87865
LinkDB
All DBs
Position
1:1918455..1919240
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AA seq
261 aa
AA seq
DB search
MSTVTKASTDPGAGSEPQADGAVQSADVSGLARSLGYEFSDLSLLRDAVTHPSLMGLERT
GRKSHKGPGIAYERLEFLGDRVVGLVVAQWLLERYPNEREGALAKRHAALVRRESLGRVA
DAIGLGAYLRLSPAEAQSGGRENRTILGDACEAVLGAMYLDGGLEPVTRFVRQALAGEID
KATPPPLDSKTTLQEWAQGRGKPLPRYELIERSGPAHEPLFVVAVHVAGMDPVSGSGSSK
RIAEKKAASTLLRQVGVQVDD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgtcaccaaggcgtccaccgatccgggcgccggctccgaaccccaggccgat
ggcgccgtccagtcggcagacgtctcaggacttgcccgttcgctgggctatgagttttcc
gatctgtcgctcctgcgcgacgccgtcacccatccgagcctgatggggctcgagcggacc
ggccgaaaatcgcacaaggggccgggcatcgcttatgaacggctggagttcctcggcgac
cgggtcgtcgggctggtcgttgcgcagtggctgctggaacgctatccgaacgagcgcgag
ggggcgctcgccaagcggcacgccgcgctggtgcgccgggagtctctcggccgtgtcgca
gacgccatcgggctgggcgcctatctgcgcctgtcgccggcggaggcgcagagtggtggg
cgggagaaccgcaccatcctgggcgacgcctgcgaggcggtgctgggcgcgatgtatctc
gatggcggactggagccggtgacgcgctttgtccgacaggcgttggccggcgagatcgac
aaggcgacgccgccgccgctggatagcaagacgaccttgcaggaatgggcgcaggggcgc
ggcaaaccgttgccccgttatgaactgatcgaacgcagcggcccggcgcacgagccgctg
ttcgtggttgcggtgcatgtggcgggtatggatccggtctccgggtcgggttcgtccaag
cgcatcgcggaaaagaaggcggccagcacattgctgcgccaggtgggagtacaagtcgat
gactga
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