KEGG   Azospirillum sp. TSH100: E6C72_10510
Entry
E6C72_10510       CDS       T09516                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
azs  Azospirillum sp. TSH100
Pathway
azs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:azs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    E6C72_10510 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:azs03400]
    E6C72_10510 (uvrA)
DNA repair and recombination proteins [BR:azs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E6C72_10510 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      E6C72_10510 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 BCA_ABC_TP_C AAA_25 nSTAND1 DnaJ_CXXCXGXG DUF4350 AAA_21 AAA_23
Other DBs
NCBI-ProteinID: QCG88109
LinkDB
Position
1:complement(2223642..2226509)
AA seq 955 aa
MNKYISVRGAREHNLKNVDVDLPRDELIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLELMQKPDVDSIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGIPY
SPATGLPIESQTVSQMVDRIMAMPEGTRLLLLAPFVRGRKGEYKKEIQDLRKRGFQRVRV
DGTMYEIDEVPALNKKLKHDIEVVVDRIVVREGLGNRLADSLETALGLADGIVWVENAET
NEQTVFSQKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGSKIYFDPMLVVPDERLS
LSKGAIAPWAGSTSKYYDQTLDSICEHFGVSMTTPWQDLPEKVRQTILFGSDGSPITMTY
DDGLRRYQTNKAFEGIVNNLERRYRETDSAWTRDELSKYQSSQPCEVCKGARLKPEALAV
KIRGCNISEAAELSIAGAGVWFSELNEHLRPKDREIAYRILKEINERLGFLNAVGLEYLT
LSRGSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLETLKRLRDIGN
TVVVVEHDEDAIRSADYLVDMGPGAGQHGGTVIAQGTPEEVQKNPDSITAQYLNGTRFVP
VPDTRRPGHPGQFLEVQGARANNLRNVSTKIPLGTFTCVTGVSGGGKSTLIIETLYKAVA
RKLMGAREHPAEHDAVLGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPMRDWFAGLPE
AKARGYGPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCHGKRYNRETLEVTY
RDKTIADVLDMTVEEGKEFFKAVPGIRDKLDTLERVGLGYIHIGQAATTLSGGEAQRVKL
SKELSRRATGRTLYILDEPTTGLHFADVEKLMEVLHALVDQGNTVLVIEHNLEVIKTADW
IIDLGPEGGTGGGEIVAEGTPEDVAKVERSYTGRYLAPYLKAKPAVRKSATRKRA
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgaacaagtacatcagcgtccgcggcgcgcgggaacataacctgaagaacgtcgacgtg
gatctgccgcgcgacgagctgatcgtcatcaccggcctatcgggatcgggcaagtcgtcg
ctcgccttcgacacgatctatgccgaggggcagcgccgctatgtggagagcctgtcggcc
tacgcgcggcagttcctggagctgatgcagaagccggacgtcgattcgatcgaggggctg
tcgccggccatctccatcgaacagaagacgacctcgaagaatccgcgctccaccgtcggt
acggtgacggagatctacgactacatgcgcctcttgtgggcgcgggtcggcatcccctat
tcgccggccaccggcctgccgatcgaaagccagacggtcagccagatggtcgaccgcatc
atggcgatgccggaaggcacgcgcctgctgctgctggcccctttcgtgcgaggccgcaag
ggggagtacaagaaggagatccaggatctgcgcaagcgcggtttccagcgcgtgcgggtc
gacggcaccatgtacgagatcgacgaggtgccggcgctcaacaagaagctgaagcacgac
atcgaggtggtggtcgaccgcatcgtggtccgcgaggggttgggcaaccgtctggccgat
tcgctggagaccgcgttgggtctggccgacggcattgtctgggtcgagaatgccgagacc
aacgagcagaccgtcttctcgcagaaattcgcctgcccggtcagcggcttcacgattcca
gagatcgagccgcggctgttctccttcaacaacccgttcggtgcctgcccggcctgcgac
ggattgggtagcaagatctatttcgacccgatgctggtggtgccggacgagcggctgtcg
ctgtccaagggcgccatcgcgccgtgggccggttcgacctccaaatattacgaccagacg
ctggacagcatctgcgagcatttcggcgtgtcgatgaccacgccgtggcaggatctgccg
gaaaaggtacgccagaccatcctgttcgggtccgacggctcgccgatcaccatgacctat
gacgacggcctgcggcgctaccagaccaacaaggcgtttgaaggaatcgtcaacaatctg
gaacggcgctaccgcgagaccgacagcgcctggacacgcgacgagctgtcgaaataccag
tcctcgcagccctgcgaggtctgcaagggcgcgcggctgaagccggaggcgctggcggtc
aagatccgtggatgcaacatctccgaagcggcggagctttccattgccggcgccggcgtt
tggttcagcgagttgaacgagcatctgcgtccgaaagaccgcgagatcgcctaccgaatc
ctgaaggagatcaacgagcggctcggcttccttaacgccgtcgggcttgagtatctgacg
ctcagccgcggctcgggcaccttgtcgggcggcgagagccagcgcatccggctggcttcg
cagatcggctccggcctgacaggcgtgctctatgtgctggatgaaccgtccatcggcctg
caccagcgcgacaacgaccggctgctggagacgctgaaacgcctgcgcgacatcggtaac
acggtggtcgtcgtagagcatgacgaggacgcgatccgcagcgccgactatctggtcgat
atgggtcccggtgccggccagcatggcggcacggtcattgcccagggaacgccggaggag
gtccagaagaaccccgacagcatcaccgcccagtatctgaacggcacccgcttcgttccg
gtgccagacacccgccggcccggccatcccggccagttcctggaggtgcagggcgcccgt
gccaacaacctccggaacgtctcgaccaagattccactcggcaccttcacctgcgtgacc
ggcgtgtccgggggcggcaagtcgacactcatcatcgagacgctgtacaaggcggtggcg
cgcaagctgatgggggcccgcgagcatccggctgagcatgacgcggtgcttggcctggag
catctcgataaggtcatcgacatcgaccagtcgccgatcggccgcaccccgcgttccaac
cctgcgacctacaccggggccttcacgccgatgcgcgactggtttgccggcctgccggag
gcaaaggcacgcggctacggccccggccgcttctccttcaacgtcaagggcgggcgctgc
gaggcttgccagggcgacggtgtcatcaagatcgagatgcacttcctgcccgacgtctac
gtcacctgcgacgtctgccacggcaagcgctacaaccgcgagacgctggaagtcacctat
cgcgacaagaccatcgccgacgtgctcgacatgacggtcgaggagggcaaggagttcttc
aaggcggttcccggcatccgcgacaagctggacacgctggaacgggtcggactcggttac
atccacatcgggcaggcggcgacgacgctgtcgggcggcgaggcgcagcgcgtcaagctg
tccaaggaactgagccgccgcgccaccggccgcacgctgtacatcctcgacgaaccgacc
accggcctgcacttcgccgacgtcgaaaagctgatggaggtgctgcatgccctggtcgat
caggggaacacggtgctggtgatcgaacataatctggaggtcatcaaaaccgccgactgg
atcatcgacctggggccggagggcggcaccggcggcggcgagatcgttgccgaaggcacc
ccggaagacgtggcgaaggtggagcgcagctacaccggccggtaccttgccccttacctg
aaggcgaagccggcggtgcggaaatcggcaacccgaaagagggcgtga

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