Azospirillum sp. TSH100: E6C72_11025
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Entry
E6C72_11025 CDS
T09516
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azs03032
]
E6C72_11025
03036 Chromosome and associated proteins [BR:
azs03036
]
E6C72_11025
03400 DNA repair and recombination proteins [BR:
azs03400
]
E6C72_11025
DNA replication proteins [BR:
azs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E6C72_11025
Chromosome and associated proteins [BR:
azs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E6C72_11025
DNA repair and recombination proteins [BR:
azs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E6C72_11025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QCG88201
LinkDB
All DBs
Position
1:2327083..2327358
Genome browser
AA seq
91 aa
AA seq
DB search
MNQAELIETVATNAGIKKADAAKVVQAVFEGISGALGRGEDVRLAGFGIFEVAERAAREG
RNPRTGEVVAIAASKAPKFKPAKQLRDLVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggccgagctgatcgaaaccgtcgccaccaacgccggcatcaagaaggccgac
gcggccaaggtcgttcaggctgtgttcgagggcatctccggcgcgctgggccgcggcgaa
gatgtgcgcctggccggtttcggcatcttcgaggtggccgagcgcgccgcccgtgaaggc
cgcaacccgcgcaccggcgaagtggtggcgatcgccgcctccaaggctccgaagttcaag
ccggccaagcagctgcgcgatctggtgaacggctga
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integrated database retrieval system
