Azospirillum sp. TSH100: E6C72_11035
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Entry
E6C72_11035 CDS
T09516
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azs03021
]
E6C72_11035 (rpoH)
Transcription machinery [BR:
azs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E6C72_11035 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
DUF3431
HTH_11
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-ProteinID:
QCG88203
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All DBs
Position
1:2328537..2329427
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AA seq
296 aa
AA seq
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MLKKLLTGENASLTRYIEESKRFPILAPDVERDLAIAWRERGNPQALEQLVGSHLRLVIK
IARGFGGYGLPLVDLVAEGNVGLMQAAQKFDPQRGFRFATYATWWIRAAIQEYILHSWSL
VKMGTTAAQKKLFFNLRRLKSQMAELEQGDLSPETVATIAAELDVPETEVVEMNRRLAAN
DSSLDATLSTDGETNWLELLADDRPTQDTMLAEADELALRRRLVGQALDRLDARERRILF
ERRLKDDPSTLEALSQQFSVSRERVRQIEVRAFEKLQKAVLSAAQALRRPVTPMVA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaagaaactgctgaccggtgaaaacgccagcctgacccgctacattgaggagtcc
aagcgcttccccatcctcgcgccggatgtcgagcgggatctcgccatcgcctggcgggaa
cgcgggaacccgcaggccctggaacagctcgtgggcagccatctccgtctcgtgatcaag
atcgcccgtggcttcggcggctatggcctgccgctggtcgatctcgtcgccgaaggcaat
gtcggcctgatgcaggccgcccagaaattcgatccgcagcgcggcttccgtttcgccact
tacgccacctggtggatccgcgccgcgatccaggaatacatcctgcacagctggtcgctc
gttaagatgggcacgaccgccgcccagaagaagctgttcttcaacctgcgccgcctgaaa
agccagatggccgaactggaacagggcgacctgtcgccggagacggtagcgaccatcgcc
gccgagctggacgtgcccgagacagaggtggtcgaaatgaaccgccgcctcgccgccaac
gacagctcgctcgacgcaacgctttcgaccgatggcgaaaccaactggctggagctgttg
gccgacgaccggccaacccaggacaccatgcttgccgaggccgacgaacttgcgctgcgc
cgccggttggtcgggcaggcgctggaccggctggacgcccgtgaacgccgcatcctgttc
gaacgccgcttgaaggacgacccttcgaccctggaagcgctgagccagcaattctcggtg
tcgcgcgaacgggtacgccaaatcgaggttcgggccttcgaaaagctccagaaggcggtt
ctgagcgccgcgcaggccctgcgccgcccggtgacaccaatggtggcctga
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