Azospirillum sp. TSH100: E6C72_11540
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Entry
E6C72_11540 CDS
T09516
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
azs
Azospirillum sp. TSH100
Pathway
azs02020
Two-component system
azs02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E6C72_11540
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
E6C72_11540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
azs02035
]
E6C72_11540
Bacterial motility proteins [BR:
azs02035
]
Flagellar system
Chemotaxis proteins
MCPs
E6C72_11540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
HBM
TMP_3
4HB_MCP_1
DUF948
DUF3853
LXG
Motif
Other DBs
NCBI-ProteinID:
QCG88294
LinkDB
All DBs
Position
1:2434048..2436042
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AA seq
664 aa
AA seq
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MSIATRIALGFAAVLLLTLAVAVVGWSGLNTYASQVEIAAQTARLDTLLYSARQEEARYL
LDVDPSASRRVRQLTDQMRSEAEALLALPNHAVPPDTLREALEKLAAYRKSFDEVVGLEV
DRFASLAKLRKQTAALLVIAQTLTQDQTARYADALARVKADPSDRAAVTTLESSALLATI
AGRLIQETRGALLDVQQFLIDHGGAGRNSLNGSIDRLLTIVGDVRKAANDGDALRESEKL
TASVMGVETEFLLVADIVARRNAARDAMRDAARTVNDQVTQLVAAQTAEREAGRSRAVLL
LWSGALGALAVGTVLSILIARSLTGPIAATTRAVQHLSEGDLTVAVPGTGRQDELGSIGR
AVATVIQVLHGLHGEMHRLSGKSVEAVEMEKGPAFHGAYGEMVALLQQTGAAFRTIGEQA
TQVAVAAGQASTAISHVSDGASEQTDDLDQVATAVGQSARAIAHVTDSTRDASDMVKDAA
DFADGGRADMARLLRVSQTIAENSRRIGRITEAITQIAVKTNILSVNASIEAARAGEQGK
GFEVVAEEVGKLADNAVESARQIAEIIEAAAALAEEGKTVTEQARRRMDGLAERVDRIDG
AFQSVAVAMEEQQASVREIERSIESVRTVASKNAAASEEIAATMVHLSRLADETRRQVSR
FQAG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgccacccgcatcgccctgggattcgccgccgtgctgctgctgacgctcgcc
gtcgccgtcgtcggttggagcgggctgaacacctacgcctcgcaggtggagattgctgcc
cagaccgcccggctggacacgctgctgtatagcgcccggcaggaagaggcccgctatctg
ctggacgtcgacccctccgccagccggcgggtgcgccagttgaccgaccagatgaggagc
gaggctgaagcgctgctggccctgcccaaccatgccgtgccgcccgacacgctgcgggaa
gcgctggagaagctggcggcctaccggaaatccttcgacgaggtggtggggctggaggtc
gaccgtttcgccagcctggcgaagctgcgcaaacagacagccgccctgctggtgatcgcc
cagaccctgacacaggatcagacggcgcgctatgccgacgcactggcccgggtgaaggcc
gatccgagcgaccgggccgcggtgaccacgttggaatcctcggccctgctggcgaccatc
gccgggcggctgatccaggagacccgcggcgcgctgctggatgtacagcaattcctgatc
gaccacggcggtgccgggcgcaattcgctcaacggcagcatcgatcggctgctgaccatc
gtcggcgatgtgcgaaaggctgccaatgacggcgacgctctgcgcgaatcggagaagctg
accgcctctgtcatgggggtggaaacggaattcctgctggtcgccgacatcgtcgcccga
cgcaatgccgcccgcgacgccatgcgcgacgccgccaggaccgtgaacgatcaggtgaca
caactggtcgccgcccagacggcggagcgggaggccggacggtcgcgcgccgtgctgctg
ctgtggagcggcgcgctcggcgcactggccgtcggcacggttttgtcgatcctgatcgcc
cgcagcctgaccggccccatcgccgccaccaccagagcggtacagcacctgtcggaaggc
gatctgacggtcgcggtgccgggaaccggccggcaggacgagttgggatccatcggccgt
gccgtcgccaccgtcatccaggtgctgcacgggctgcatggcgagatgcacagactgtct
ggaaagagtgtggaggccgtggagatggaaaagggtccggccttccatggagcctatggc
gagatggtggctctgttgcagcagaccggtgcggccttccgcaccatcggcgaacaggcg
actcaggtcgccgtcgccgcagggcaagccagcaccgccatctcccacgtgtcggacggc
gcatctgaacagaccgacgatctggatcaggtggcgacggcggtcggccagtcggcccgc
gccatcgcccatgtcaccgacagcacgcgtgatgcctccgacatggtgaaggatgccgcc
gacttcgccgatggcggacgggcggacatggcacggcttctgcgcgtatcacagaccatc
gccgagaacagccgtcgcatcggccgcatcaccgaggccatcacccagatcgcagtgaag
accaacatcctgtcggtcaacgcctccatcgaagccgcccgcgccggcgagcagggcaag
ggcttcgaggtggtggccgaggaggtcggcaaactcgccgacaacgcggtggaaagtgcc
cggcagatcgccgagatcatcgaagccgccgcggcgctggccgaagagggcaagacggtg
accgaacaagcccggcgccggatggacgggctcgcggagcgggtcgaccgcatcgatggc
gccttccaatcggtcgcggttgccatggaggagcagcaggcctcagtccgtgagatcgaa
cggtcgatcgaaagcgtgcgcacagtcgcctccaagaacgccgccgcgtcagaggaaatc
gccgcaaccatggtgcatctctcccggctggcggacgagacgcggcgtcaggtgtcacgg
ttccaagccggctga
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