Azospirillum sp. TSH100: E6C72_17235
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Entry
E6C72_17235 CDS
T09516
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azs03400
]
E6C72_17235
DNA repair and recombination proteins [BR:
azs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E6C72_17235
Archaeal homologous recombinant proteins
E6C72_17235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
Striatin
AAA_21
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QCG89520
LinkDB
All DBs
Position
2:complement(1020375..1024136)
Genome browser
AA seq
1253 aa
AA seq
DB search
MRILAVRGANLTSLDGPFAIDFDREPLRRAGLFAITGPTGAGKSTILDALCLALFDSMPR
LPEGRGEMLGPEGDPNSIRTTDVRTVLRRGAGFGWAEVDFVGIDGDAYRARWEVRRARQK
SQGALQQQSMSLSSLDGQRRFGDGKKSVLEEIERRLGLSFEQFRRAVLLAQGDFATFLKA
PPRERSALLELLTGTEIYSRLSIAAHERANAEKQTLEMLVAQGGGIGVLSDDDRAALQRE
AAGAAKAVRSGEQALAHAQAALAWYDRDGQLAAAEGKAVETAEAAERAWSEAEDRREATI
RLRGLQPVRPVLADADRAGSEAAEAAAAVVRAEAALAAARLTVEEATGRHGEARRRFEAA
YAEQAKAEPDLERAADLDGRVATLTAEQRTAEATAKAAVQRSGMLQKAVQDIDTTLSAAR
NDASRLEAWLREQADFAGVAGQWERWDRLLARIITDRRASLAAAQERGRLDRELAATQAA
ARGEEGRLSEAREHCRSAERVLEKLRGEAVPSLEGARQARTDAGQRRDGLLALLATGEAR
HRLETERAAAEGERLRLLAEAERDGTAARELAERRVGQRAAVDEAERTLQRLLLAQREDV
ESLRGRLVEAEPCPVCGSAEHPWAGAGATPLGRVTQDQEKHLAGLREALAGTVTRHAALE
AAEQAARKAAEGQTARQAAIAQEAEGLVARWTAQAAAIGWDAEDGTLTGLRREVEAVEHR
LAVIARDEERALDHRRRVDAAQQEQRRLETAAASLASECETTRQRLADGRQSLALAVAAL
ERAVADQEAALAELAEGLAGEAGWRSRLDQEPEAYRTGMSARVTEYRGKSDALARAVREV
ERTSGERAVQSAELEAALRAEKEAQSRAGDLAGRLAEMRRARTALLGGRPVSEVRKALAG
ERHEAEALMEKATFARQDAIARLSAAEQERETRGEAAKRCADKAKAAGERLERAVAERGV
GLDEVRRLLATPESALEAEELALAVLERARGDAALVVAERRRQRADHHAVDRPALNIEEA
EGTAETIRTELERDRDRLGSARGRLEADDASRQRLAGLSAAIEAQQACCGLWGKMAQLIG
SANGQKMRNFAQSLSLDLLLTHANRHLEDLARRYRLERVAGADLEIQVVDREMGDERRGV
HSLSGGELFLVSLALALGLSAMAAGTSGGIGTLFIDEGFGTLDPDSLDVALSCLEALQAD
GRQVGVISHVPAMVERIGTQIRVMPIGGGRSRVTVQSVAGAALGVAIEEVEEV
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgcggattctcgcggtgcgcggcgccaacctgaccagcctggacggccccttcgccatc
gatttcgaccgggagccgctgcggcgggccggactgttcgccatcaccgggccgaccggc
gccggcaagagcaccatcctcgacgccctgtgcctcgccttgttcgacagtatgccgcga
ctgcccgagggacgcggcgagatgctggggccggagggcgatcccaacagcatccgcacc
accgatgtgcgcacggtgttgcggcggggcgccggcttcggctgggccgaggtggatttc
gtcggcatcgacggcgacgcctatcgcgcccgctgggaagtgcggcgggcgcgacagaag
tcacagggagccttgcagcagcagagcatgtcgttgagcagcctcgacggccaacggcgc
ttcggcgatggcaagaagagcgtgctggaggagatcgaacgacggctcggcctgagtttc
gagcagttcaggcgggcggtgctgctggcccagggcgacttcgccaccttcctgaaggcg
ccgccgcgcgagcggtccgcccttttggaactgctgacgggaaccgaaatctactcgcgc
ctgtcgattgcggcgcacgagcgggcgaatgcggagaaacagacgcttgaaatgctggtg
gcgcagggcggcggcatcggcgtgctgagcgacgacgaccgcgcggccttgcagagggag
gccgctggagccgcgaaggcggtgcgcagcggcgagcaggccttggcgcatgcccaggcg
gcgctggcctggtacgaccgcgacggccaactcgcagcggcggaaggcaaggcggtcgag
acggcggaagcggcggagcgggcctggagcgaagccgaagaccggcgcgaagccaccatc
cggctgcgcgggctgcagccggtgcggccggtgctggccgatgccgaccgggcgggcagc
gaagcggcggaggccgcagcggcggtggtgcgggcggaggcggcgttggccgcagcacga
ctgacggtggaggaggcgaccggccgtcatggcgaggcccggcgccgcttcgaagcggcc
tacgcggaacaggccaaggccgaacccgatcttgaacgcgccgcagacctcgatgggcgg
gtcgcgaccctgaccgcggaacagaggacggccgaagcgacggcgaaggcagcagtccag
cgcagcggcatgctacagaaggcggtgcaggatatcgacaccaccctgtccgcggcgcgc
aacgacgcgtcccggctggaagcctggctgcgggagcaggcggacttcgccggagtggcc
gggcagtgggaacgctgggaccggctgctggcccgaatcatcactgatcggcgggccagt
ctggctgccgctcaagaacgtggacggctggatcgggagcttgcggcgacgcaagccgcg
gcgcggggtgaggaaggccggctgtcggaggcgcgggagcactgccgctccgccgaacgg
gtgctggagaagttgcgcggcgaagcagtgccgtctctggagggggcacgacaggcacga
acggacgccggacagcggcgcgacggactgcttgctctgctcgccaccggcgaggcgcgc
caccgcctggagacggagcgggcggcggcagaaggtgaacggctgcggttgctggccgaa
gcggagcgggacgggacggcggcgcgagagcttgccgaacgccgtgtcgggcagcgcgcc
gcggtcgatgaggcggagcggaccctgcaacggctgctgctggcccagcgcgaggatgtg
gaaagcctgcgcgggcggctggtcgaggcggagccctgcccggtctgcggttcggccgag
catccctgggctggcgccggggcgacgccgctcggccgggtgacgcaggaccaggaaaag
catcttgccgggttgcgcgaggcgctcgccgggacggtaacccgccatgccgcgctggag
gcggcggaacaggcggcgcgcaaagcggccgaagggcagacggcccgccaggcggccatc
gctcaggaagccgaaggattggtggcgcgctggaccgcgcaggcggcggccatcggctgg
gacgccgaggatggaacgctcaccgggctccgcagggaagtcgaagcggtcgagcatcgg
cttgcggtcatcgcgcgggacgaggaacgggcgctcgaccatcgccggcgggtcgatgcg
gcacagcaggaacaaaggcggctggaaaccgcggcggccagtctggcaagcgagtgcgag
acgacccgacagcggctggccgatggacggcaatccctggccctggcggtggcggcactg
gagcgggcagttgccgaccaggaggccgcgctggcggaactggccgaaggtttggcggga
gaagccggctggcggtcgcggctggaccaggagcctgaagcgtaccggaccgggatgtcg
gcccgggtgaccgaatatcgggggaagagcgatgcgctggcccgcgccgtccgcgaggtc
gagcggaccagcggtgagcgagcggtgcagagcgccgagctggaagcggcgttgcgggcg
gagaaggaggcgcagtcccgggcgggcgacctcgcaggacgactggcggaaatgcggagg
gcacgcaccgcactgctgggtggacggccggtgtcggaggtgcgcaaggcgttggccgga
gaacggcatgaggccgaggccttgatggaaaaggccaccttcgcgcggcaggatgccatc
gcccggctgtcggcggcggaacaggagcgggaaacccgcggcgaggcggcgaaacggtgc
gccgacaaggccaaggcagccggcgaacggctggaacgggccgtcgccgagcgcggggtt
gggctggacgaggtccgccggctgctggctacccccgaaagcgcgttggaggcggaagaa
ctggctctggcggtgctggagcgggcgcgcggtgatgcggcgctggttgtcgccgaacgg
cgacggcagcgcgctgatcatcacgcggtggaccggccggccttgaacatcgaggaggct
gaggggacggcggagaccatccgtacggagcttgagcgcgaccgcgaccgcttgggctcg
gcgcgtggacggctggaggccgacgatgccagccggcaacggttggcggggctgtcggct
gcgatcgaggcgcagcaggcgtgctgtggactgtggggcaagatggcgcagttgatcggc
tcggcgaacgggcagaagatgcgcaatttcgcccagagcctgagcctggacctgctgttg
acccatgccaaccgtcatctggaggacctcgcccgccgttaccggctggagcgggtggcg
ggggccgacctggaaattcaggtggtcgaccgcgagatgggcgacgagcggcgcggcgtg
cacagtctgtcgggcggcgagctgttcctggtgtcgctggccctggcgctcgggctgtcg
gcgatggcggcggggacctcgggcgggatcggcactctgttcatcgacgaggggttcggc
acgctcgaccccgacagcctggacgtggcgctgtcctgtttggaggcattgcaggcggac
gggcgtcaggtcggcgtcatcagccacgttccggcaatggtcgagcgcatcggcacgcaa
atccgcgtgatgccgatcggcggcggacgcagccgggtgacagtgcaatcggtggcggga
gcggcgctgggggtggcgatcgaggaggttgaggaggtgtag
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