Azospirillum sp. TSH100: E6C72_19050
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Entry
E6C72_19050 CDS
T09516
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azs03032
]
E6C72_19050
03400 DNA repair and recombination proteins [BR:
azs03400
]
E6C72_19050
Enzymes [BR:
azs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E6C72_19050
DNA replication proteins [BR:
azs03032
]
Prokaryotic type
DNA Topoisomerases
E6C72_19050
DNA repair and recombination proteins [BR:
azs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E6C72_19050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QCG89890
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All DBs
Position
3:271104..272234
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AA seq
376 aa
AA seq
DB search
MDSPLPSPDAPSPEAPSPEQEAACAGLTYSSDEMPGIRRRRYGKGFRFLWPDGRQVMEEE
TLDRIRKLAIPPAYRDVWICPDPDGHLQATGRDAKGRKQYRYHRRWTELREGTKFGRMLD
FCRALPPLRERVNADLGHRGLPREKVLAAVVRLLETTLIRVGNETYARENQSYGLTTLRD
DHAEIEGTEVRFSFKGKSGKEWNVALKDRRLARVVAACRDVPGDELFQYLDRDGQRHAVT
SGDVNAYLREATGADFTAKDFRTWAGTVLAAMALREFESFDSASAAKRNVTRAIEQVATR
LGNTPSVCRKSYVHPEVLDAYLEGGLLDSLKREVEAELRDELAGLSGEEAAVLAFLRERL
ERETAARTREGARRKN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggacagcccccttccctcccccgacgccccctcgcccgaagctccgtcgcccgaacag
gaagccgcctgcgccgggctgacctacagttccgacgagatgccgggcatccggcggcgg
cgctacggcaagggcttccgcttcctctggccagacgggaggcaggtgatggaggaggag
acgctggaccgcatcaggaagctggcgatcccgccagcttaccgcgacgtctggatctgc
cccgatcccgacggccatctccaggcgaccggccgcgacgccaaggggcgcaagcagtac
cgctaccaccggcgctggaccgagctgcgcgagggcaccaagttcggccgcatgctggat
ttctgccgcgccctgccccctctgcgcgagcgggtgaacgccgacctcggccatcgcggc
ctgccgcgcgagaaggtgctggcggcggtggtgcggctgctggagaccacgctgatccgc
gtcggcaacgagacctacgcccgcgagaatcagagctacggcctgaccaccctgcgcgac
gaccatgcggagatcgaaggaacggaggtccgcttctccttcaaaggcaagtccggcaag
gaatggaacgtcgcgctgaaggaccggcggctggcccgcgtcgtcgccgcctgccgcgac
gtgcccggcgacgagctgttccagtatctcgaccgcgacggccagcgtcacgccgtgacc
tccggcgacgtcaacgcctatctgcgcgaggcgaccggcgccgatttcaccgccaaggac
ttccgcacctgggccggcacggtgctggccgccatggctttgcgggagttcgagagcttc
gacagcgccagcgccgccaagcgcaacgtcacccgcgccatcgagcaggtcgccacccgg
ctgggcaacacccccagcgtctgccgcaagagctacgtccaccccgaagtgctggacgcc
tatctggagggcggcctgctggattcgctgaagcgcgaggtcgaggcggagctgcgcgac
gaactggccggcctgagcggcgaggaagccgcggtgctggccttcctgcgcgaaaggctg
gagcgcgagacggcggcccggacgcgggaaggagcgcggcggaagaattag
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