Azospirillum sp. TSH100: E6C72_19455
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Entry
E6C72_19455 CDS
T09516
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
azs
Azospirillum sp. TSH100
Pathway
azs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E6C72_19455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
azs02000
]
E6C72_19455
Transporters [BR:
azs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
E6C72_19455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
SH3_19
CdiA_helical
Motif
Other DBs
NCBI-ProteinID:
QCG89963
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All DBs
Position
3:373325..374371
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AA seq
348 aa
AA seq
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MSKIKVALGFAATFTALTALSSAASARDLTVVSWGGAYQDVQKKVYFEPFKATGTPMSDE
SWDGGVGVLRAKVQGGASTWDVVQVESEELALGCDEGLYEKLNYSKIGGEDAYLPSTVNA
CGVGAIVYDFVLGYDKDKLKDAPKGWADFFDTKKYPGKRGLRQGAKTTLEIALMADGVAP
ADVYKVLGTEAGVDRAFKKLDTIKNDIVWWKAGAQPPQLLASGEVAMTSVYNGRIDAANK
KESKNFGMVWNGALFTIDSWVILKGSPNQDAAYKFLNFVGKPENQAKLSEGIAYGTSNKK
APSLLPKPVLADLPTSPDNMKNAIEINTDFWLENIDRLTERFNKWAAK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagattaaggtggctctcggtttcgctgcgaccttcaccgccctcacggccctg
tcatcggccgccagcgcccgcgacctcaccgtcgtgtcgtggggcggcgcctatcaggac
gtccagaagaaggtgtatttcgagccgttcaaggccaccggcacgccgatgagcgacgaa
tcctgggacggcggcgtcggcgtcctgcgcgccaaggtccagggcggcgcctccacctgg
gacgtcgtccaggtcgagagcgaggaactggcactgggctgcgacgaaggcctgtacgag
aagctgaactactccaagatcggcggcgaggatgcttatctgccgtccaccgtcaacgcc
tgcggcgtcggcgccatcgtctatgacttcgtgcttggctacgacaaggacaagctgaag
gacgcgccgaagggctgggccgatttcttcgacaccaagaagtatccgggcaagcgcggc
ctgcgccagggcgccaagaccacgctggagatcgcgctgatggccgacggcgtggctccg
gccgacgtctacaaggttctgggcaccgaggccggcgtcgaccgcgccttcaagaagctc
gacaccatcaagaacgacatcgtctggtggaaggccggcgcccagccgccgcagctgctg
gcttcgggcgaagtggcgatgacctcggtctacaacggccgcatcgacgccgccaacaag
aaggaaagcaagaacttcggcatggtgtggaacggcgcgctgttcaccatcgacagctgg
gtcatcctgaagggcagcccgaaccaggacgccgcctacaagttcctgaacttcgtcggc
aagccggagaaccaggccaagctgtccgaaggcattgcctacggcacgtccaacaagaag
gcgccgtcgctgctgccgaagccggtcctggccgatctcccgacctcgccggacaacatg
aagaacgcgatcgagatcaacaccgacttctggctggagaacatcgatcgcctgaccgaa
cgcttcaacaagtgggcggccaagtaa
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