Azospirillum sp. TSH100: E6C72_20605
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Entry
E6C72_20605 CDS
T09516
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azs03021
]
E6C72_20605
Transcription machinery [BR:
azs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E6C72_20605
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
PhyR_sigma2
UPF0122
RIF5_SNase_1
HTH_Tnp_4
DUF134
HTH_38
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
QCG90151
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Position
3:complement(682107..682829)
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AA seq
240 aa
AA seq
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MHPSSGERWIMQMADSRADSRLDLPREDSCVGRSMSGDLIRGRASGVITPADEDSDETLM
AQIRSGSQTAYRRLVHRHLKRTYALARRLTGNEAEAEDVVQDAFLQVWQRRTQWSDDGGA
RFTTWLYRVVLNRCIDHKRRPVGQDLEAVDEPSDNAPDAVSTIHRRQVAARLSDAQTKLT
PQQRAAVTLFYYENLSNSDIASVMQISVGAVESLLKRARQQLRLLLRASAQAARDSFDDG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgtcgtcgggagaacgatggatcatgcaaatggcggactctcgggcggactct
cggcttgatcttccgcgggaagattcctgcgtcggacgctccatgtccggggatctgatc
cgggggcgtgcctccggcgtcatcactccggcggacgaggacagcgacgagacgctgatg
gcgcaaatccgctccggcagccagacggcctaccggcggctggtccatcgccatctgaaa
cgcacctacgcgctggcccgccgcctgaccggcaacgaggcggaggccgaggatgtcgtg
caggacgccttcctccaggtctggcagcggcgcacccagtggagcgacgacggcggcgcc
cgcttcaccacgtggctctatcgcgtggtgctgaaccgctgcatcgaccacaagcgccgg
ccggtcggccaggatctggaagcggtggacgagccgtcggacaatgcgcccgacgcggtc
agcaccatccatcgccggcaggtcgccgcgcgtctgtccgatgcccagaccaagctgacg
ccgcagcagcgcgccgcggtgacgctgttttattacgaaaatttaagcaattccgacatc
gccagcgttatgcaaatcagcgtcggtgcggtagagtccctattgaagcgtgcgcgccag
cagctcagactattgttgcgcgcaagtgcgcaggcggccagggattcattcgatgacgga
tga
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