Azospirillum sp. TSH100: E6C72_21440
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Entry
E6C72_21440 CDS
T09516
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
azs
Azospirillum sp. TSH100
Pathway
azs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E6C72_21440 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azs03019
]
E6C72_21440 (groL)
03110 Chaperones and folding catalysts [BR:
azs03110
]
E6C72_21440 (groL)
03029 Mitochondrial biogenesis [BR:
azs03029
]
E6C72_21440 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
azs04147
]
E6C72_21440 (groL)
Enzymes [BR:
azs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E6C72_21440 (groL)
Messenger RNA biogenesis [BR:
azs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E6C72_21440 (groL)
Chaperones and folding catalysts [BR:
azs03110
]
Heat shock proteins
HSP60 / Chaperonin
E6C72_21440 (groL)
Mitochondrial biogenesis [BR:
azs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E6C72_21440 (groL)
Exosome [BR:
azs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E6C72_21440 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E6C72_21440 (groL)
Exosomal proteins of breast cancer cells
E6C72_21440 (groL)
Exosomal proteins of colorectal cancer cells
E6C72_21440 (groL)
Exosomal proteins of bladder cancer cells
E6C72_21440 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCG90298
LinkDB
All DBs
Position
3:complement(880998..882629)
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AA seq
543 aa
AA seq
DB search
MAAKDVKFSADARDRILRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEI
ELADRFENLGAQLVREVASKTADLAGDGTTTATVLAQAIVREGAKAVAAGLNPLDLKRGI
DRAVAAVIADVKARAKTISTNDEVAQVGTISANGERAIGAIIAEAVAKVGNDGVITVEEA
KSLETELNVVEGLQFDRGYLSPYFVTNAEKLVVDFDNPCILIHDKKLSSLQPLLPVLEAV
VQSSRPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAILEDIAILTNGQV
ISEDIGLKLETVSLADLGTAKRVVIAKEETTVIDGAGGREAIDARIAQIRAQIEETTSDY
DREKLQERLAKLSGGVAVIRVGGSTEVEVKERKDRVDDAVHATRAAIAEGIVPGGGVTLL
YSTRAIDAVVPVNDDERVGIDIVRRALQAPVRQIAENAGADGSVIVGKLLEGNDTAFGYD
AQTGEFTDLLKAGIIDPAKVVRIALQDAASVAGLLITTEALIVERPEPKSPAAPAGAGGG
YDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaggacgtcaaattctccgccgatgcccgtgaccgcatcctgcgcggcgtc
gacaccctcgccaatgccgtgaaggtcacgctgggcccgaagggccgcaacgtcgtgatc
gagaaatccttcggcgctccccgcatcaccaaggacggcgtgtcggtcgccaaggagatc
gagctggccgaccgcttcgaaaatctcggcgcccagctggtgcgcgaggtggcttcgaag
accgccgatctggccggcgacggcaccaccaccgccacggtgctggcccaggccatcgtc
cgcgaaggcgccaaggccgtcgccgctgggctgaacccgctggacctcaagcgcggcatc
gaccgcgccgtcgcggcggtgatcgccgacgtgaaggcgcgggccaagaccatctccacc
aacgacgaggtggcgcaggtcggcaccatctccgccaacggcgagcgcgccatcggcgcc
atcatcgccgaggcggtggccaaggtcggcaacgacggcgtgatcacggtggaggaggcc
aagagcctggagaccgaactgaacgtcgtcgaagggcttcagttcgaccgcggctatctc
tcgccctacttcgtcaccaacgccgagaagctggtggtcgatttcgacaacccgtgtatc
ctgatccacgacaagaagctgtcgagcctccagccgctgctgccggtgctggaggcggtg
gtgcagtcctcccgtccgctgctgatcatcgccgaggatgtcgagggcgaggcgctggcg
accctggtggtcaacaagctgcgcggcggcctgaagatcgccgcggtgaaggcgccgggc
ttcggcgaccgccgcaaggcgatcctggaggacatcgccatcctcaccaacggccaggtg
atcagcgaggacatcggcctcaagcttgagacggtctcgctggccgatctcggcaccgcg
aagcgggtggtgatcgccaaggaggagaccacggtgatcgatggggccggcggccgcgag
gccatcgacgcccgcatcgcccagatccgcgcccagatcgaggaaaccacctccgactac
gaccgcgagaagctgcaggagcggctggccaagctgtcgggcggcgtcgccgtgatccgc
gtcggcggctcgaccgaggtcgaggtgaaggagcgcaaggaccgcgtggacgacgccgtc
cacgccacccgcgcggccatcgccgagggtatcgtgcccggcggcggtgtcactttgctc
tactccacccgcgccatcgatgcggtggttccggtcaacgacgacgagcgcgtcggcatc
gacatcgtgcggcgcgcgcttcaggcgccggtgcgccagatcgccgagaatgccggggcc
gacgggtcagtcatcgtcggcaagctgctggaggggaacgacaccgccttcggctacgac
gcgcagaccggcgaattcaccgacctgctgaaggccggcatcatcgacccggccaaggtc
gtgcgcatcgccttgcaggacgcggcgtcggtcgccggcctgctgatcaccaccgaggcg
ctgatcgtcgagcgcccggaaccgaagtccccggcagcaccggccggggccggcggcggt
tacgatttctga
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