Azospirillum sp. TSH100: E6C72_26610
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Entry
E6C72_26610 CDS
T09516
Name
(GenBank) ribonuclease E
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azs03019
]
E6C72_26610
03009 Ribosome biogenesis [BR:
azs03009
]
E6C72_26610
Messenger RNA biogenesis [BR:
azs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E6C72_26610
Ribosome biogenesis [BR:
azs03009
]
Prokaryotic type
rRNA processing factors
E6C72_26610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
QCG91367
LinkDB
All DBs
Position
5:complement(270692..271939)
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AA seq
415 aa
AA seq
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MSRLELLVDRDGPLTRAAVLADGRLTDLHVDHADRPSLVGAIILGRVERIATGLNGAFVD
LGNGLSGLLPAADVRRPILDDDSPQSRAHRHPQRPGAKPAPIGALLRTGQPVLVQVKADA
VGAKGPSLTMDLTLPGRFLVHAPLGRDIAVSKRLGSGPERAALAHRIEQLATGAGWIVRA
GAGQISDDLLAAESEALHLQWRAIRDDARAGCAPRLLHPGPDAPTRALIEQGAAAPAAIL
VDDPPPTGGIKIGEGPLLAGLRDWCGRHAPDLLPRLGAHRDAQHLFDLRDLDSAIAELLD
VRVLLPLGGSLVIERTEALTVVDVNAGERGNPLEVNLDAAAEIARQLRLRNVGGIVVVDF
VNMRSRGDAERLLAALSQAVESDPVQTQIYGMSKLGLVELTRARRGTPLAALLRP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcttgagctgctggtcgaccgcgacggtccgctgacgcgggcggcggtgctg
gccgatggccgcctgaccgacctgcacgtcgaccatgccgaccgaccgtcgctggtgggc
gccatcatcctgggccgggtggagcggatcgccaccggcctgaacggcgccttcgtcgat
ctcgggaacggcctttccggtttgcttcccgccgccgacgtgcgtcggcccatcctcgac
gacgactcgccccaatcgcgcgcccaccgccatccccaacgcccgggcgccaagccggcg
ccgatcggcgcgcttctgcgcaccggccagccggtgctggtgcaggtgaaggccgatgcc
gtcggcgccaagggaccgtcgctgacgatggacctcaccctgcccggccgctttctggtg
cacgccccgctcggccgtgacatcgcggtgtccaaacgcctcggttccgggccggaacgc
gcggcgctggcccaccgcatcgaacagctcgccaccggtgccggctggatcgtgcgtgcc
ggcgccggccagatatccgacgatcttctggccgccgaatcggaggcgctgcacctgcaa
tggcgcgccatccgcgacgatgcccgcgccggctgcgccccgcgcctgctgcatcccggc
cccgacgccccgacccgcgccctgatcgagcagggggccgccgcccccgccgccatcctg
gtcgacgacccgcctcccaccggcgggatcaagatcggcgagggaccgctgctggcaggc
ttgcgcgactggtgcggccgccatgcccccgacctgctgccgcgactcggcgcccatagg
gacgcgcagcatctgttcgacctgcgcgacctcgactctgcgattgccgaacttctcgac
gtccgggtcctcttgccgctcggcggctcgctggtgatcgagcggacggaggcgctgacg
gtggtcgacgtgaatgccggggagcgcggcaacccgctggaggtcaacctcgatgccgcg
gcggagatcgcccgccagcttcggctgcgcaatgtcggcggcatcgtggtggtggatttc
gtcaacatgcgcagccgcggcgacgccgaacgtctgctggccgcgctgtcgcaggcggtg
gaaagcgacccggtgcagacccaaatttacggcatgtccaaactgggtctggtcgaactg
acccgcgcccgccgtggcacgccgctggcggccctgctgcggccctga
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