Azospirillum sp. TSH100: E6C72_26740
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Entry
E6C72_26740 CDS
T09516
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18307
multidrug efflux pump
Organism
azs
Azospirillum sp. TSH100
Pathway
azs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E6C72_26740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
azs02000
]
E6C72_26740
Transporters [BR:
azs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E6C72_26740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QCG91391
LinkDB
All DBs
Position
5:complement(299526..302600)
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AA seq
1024 aa
AA seq
DB search
MGSFTDIFIRRPVLSLVVSLLLLLVGARALLELPIRQYPQLQNTVITVTTSYPGASPELM
QGFIATPIEQAVATAEGLDYLTSSSTQGQSVVTAYVRLNFDPNVAMTDVMAKVNQVKYQL
PKEANDPIILKSTGETTSILYMGFSSPDLSGAAISDYLTRVVQPVLSTVEGVAQAKILGG
QTFAMRLWLDPAKMAARNISPADVSAAIAANNYQSAPGQAKGVFVVSNVTANTGLTDVDQ
FRDMVVKAKDGALVRMRDIATVELSSKSFDASVAMNGQQAIFIGVDATPTGNPLNIVADI
RKMEPDLRRNLPPGMKMEIVYDSTRFIQASIDEVVKTLVEAVAIVIVVIFLFLGSFRSVL
IPIVTIPLSIVGAATFMLALGFSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHIEHGKSA
VAASLIGAREIIGPVISMTITLAAVYAPIGLLGGLTGALFREFAFTLAASVIVSGVVALT
LSPMMCSIILKEGKPGRFAAFLDRQFERLAGWYERRLHGMLDYRAATLLFAVGILLSVGY
LFANTMAELAPEEDQGILFGISKAPQYANLDYIDSFGKQIDDTFASFPETDTRFVLTGVP
TLNQGFAGMILKPWGERARSAKQLQPLAQAELGKVTGINVFLVSPPALPGSTGGLPVQMV
ISSPGDYRTIFDAIERIKDAATKSGMFIVTDTDLKYDSPVVRLKIDRAKAADLGLSMKSV
GDTLAVLVGGNYVNRFNLNGRSYEVIPQVPRAERLTPESLTNYYVTSGSGAQIPLSTVVS
VETAVEPNALNKYNQLPSATFSAVPMPGVSMGQVVDFLEQQARIQLPAGFNHAYLSESRQ
FVTEGSQLMVTFAFALIVIYLVLAAQFESLRDPLVILVSVPMSICGALLPLFFGAATMNI
YTQVGLVTLIGLISKHGILLVEFAREMQLNEGVDRRTAIEHAARVRLRPILMTTAAMVVG
LLPLLTAAGAGAASRFSIGLVIVSGMLIGTLFTLFVLPAVYTLLAKDHYAASRSGRAEQL
RSMT
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtttcaccgacatcttcatccgccggcccgtcctgtcgctcgtggtcagcctg
ctgctcctgctggtcggcgcccgcgccctgctggaactgccgatccggcagtatccgcaa
ttgcagaacacggtcatcaccgtgaccaccagctatcccggcgcctcgccggagctgatg
cagggcttcatcgccacgccgatcgaacaggcggtggcgacggcggaggggctcgactat
ctcacctcctcctccacccagggacagagcgtcgtcaccgcctatgtcaggctgaacttc
gaccccaacgtcgcgatgaccgacgtgatggcgaaggtcaatcaggtcaaataccagctt
ccgaaggaggccaacgacccgatcatcctgaaatcgaccggcgagacgacctcgatcctc
tatatgggcttctccagccccgacctgtcgggtgcggcgatctccgactatctgacccgc
gtggtgcagccggtgctgtcaacggtggagggtgtggcgcaggccaagatcctgggcggc
cagaccttcgccatgcggctgtggctcgaccctgccaagatggcggcgcgcaacatctcg
ccggccgacgtgtcggcggccatcgccgccaacaactaccagtcggcccccggtcaggcg
aagggcgtcttcgtcgtctccaacgtcaccgccaacaccggcctgaccgacgtcgaccag
ttccgcgacatggtggtgaaggcgaaggacggggcgctggtgcgcatgcgcgacatcgcc
acggtcgaactcagctccaagagcttcgatgccagcgtggcgatgaacggccagcaggcg
atcttcatcggcgtcgacgccacccccaccggcaacccgctgaacatcgtcgccgacatc
cgcaagatggagccggacctgcggcgcaacctgccgcccggcatgaagatggaaatcgtc
tatgacagcacccgcttcatccaggcatccatcgacgaggtggtgaagacgctggtcgag
gcggtcgccatcgtcatcgtcgtcattttcctgttcctgggctccttccggtcggttctg
atcccgatcgtcaccatcccgctgtccatcgtcggcgccgccaccttcatgctggctttg
ggcttctcgctgaacctgctgacgctgctggcgatggtgctcgccatcggcctcgtggtc
gacgacgccatcgtggtggtggagaacatccaccggcacatcgagcatggaaaatcggcg
gtcgccgcctcgctgatcggcgcgcgcgagatcatcggaccggtcatctcgatgaccatc
accctggcggcggtctacgcccccatcggcctgctgggcggcctgaccggcgcgctgttc
cgcgaattcgccttcacgctcgccgcatcggtgatcgtatcgggcgtggtggcgctgacg
ctgtcgccgatgatgtgctccatcatcctgaaggagggaaagccgggccgcttcgccgcc
ttcctcgaccgccagttcgagcggctggccggatggtacgagcggcggctgcacggcatg
ctggactatcgtgccgcgaccctgctgttcgccgtcggcatcctgctgtcggtcggctac
ctgttcgccaacaccatggcggaactggcgccggaggaggaccagggcatcctgttcggc
atctccaaggcgccgcagtatgccaacctcgactatatcgacagtttcgggaagcagatc
gacgacaccttcgccagcttcccggagaccgacacgcgcttcgtcctgaccggcgtgccg
accctgaaccagggcttcgcgggcatgatcctgaagccgtggggcgagcgagcgcggtcg
gccaagcaactccagccgctggcccaggccgagctgggcaaggtgaccggcatcaacgtg
ttcctggtgtcgccgccggccctgcccggctccaccggcggcctgccggtacagatggtg
atctccagccccggcgattaccgcaccattttcgacgccatcgagcggatcaaggacgcc
gccaccaaaagcggcatgttcatcgtcaccgacaccgacctgaaatatgacagcccggtc
gtccggctgaagatcgaccgcgccaaggcggccgacctcggcctgtcgatgaagtcggtg
ggcgacacgctggcggtgctggtcggcggcaactacgtcaaccgcttcaacctgaacggc
cgctcctacgaggtcattccccaggtgccgcgggccgagcgtctgacgcccgagtcgctg
accaactactacgtcacctccggatcgggcgcccagatcccactgtccaccgtggtgtcg
gtggaaacggcggtggagcccaatgcgctgaacaagtacaatcagctgccctcggccacc
ttctccgccgtgccgatgccgggcgtctccatgggacaggtcgtcgacttcctggagcag
caggcgcgcatccagttgccggccggcttcaaccacgcctacctgtcggaatcgcggcag
ttcgtgacggagggcagccagctgatggtcaccttcgccttcgcgctgatcgtgatctat
ctggtgctggcggcgcagttcgagtcgctgcgcgacccgctggtgatcctggtgtcggtg
ccgatgtcgatctgcggggcgctgctgccgctgttcttcggcgccgccaccatgaacatc
tacacccaggtcggtctggtgacgctgatcggcctgatctccaagcacggcatcctgctg
gtggagttcgcccgcgagatgcagctcaacgagggggtcgaccgccgcaccgcgatcgag
catgccgcccgcgtccgcctgcgtccgatcctgatgaccaccgcggcgatggtggtcggc
ctgctgccgctgctgaccgcggcgggcgccggtgcggccagccgcttctccatcggtctg
gtcatcgtgtccggcatgctgatcggcacgctgttcacgctgttcgtcctgccggcggtc
tacaccctgctggccaaggaccattacgccgcctcgcgctccggccgggcggagcagctg
cgcagcatgacctga
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