Azospirillum sp. TSH100: E6C72_27750
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Entry
E6C72_27750 CDS
T09516
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
azs
Azospirillum sp. TSH100
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
azs03009
]
E6C72_27750 (rimO)
Enzymes [BR:
azs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
E6C72_27750 (rimO)
Ribosome biogenesis [BR:
azs03009
]
Prokaryotic type
ribosomal protein modification factors
E6C72_27750 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QCG91668
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All DBs
Position
5:512898..514217
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AA seq
439 aa
AA seq
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MGAPKVGIVSLGCPKALVDSERILTRLRAEGYEISPSYDGADVVLVNTCGFLDSAKKESL
DAIGEAIKENGRVIVTGCMGVESDMIRQIHPDVLAVTGPHQYEQVVSAVHDAVPPTHNPF
TDLVPPEGLRLTPRHYAYLKISEGCNNRCSFCIIPSLRGDLVSRPIHSVLREAEKLAVAG
VKELLVISQDTSAYGVDVKYKTEKWYDREVRTRFFDLCNELANFDLWVRLHYVYPYPHVD
EVIPLMAEGRILPYLDIPFQHASPTVLKAMRRPAAQEKQLDRIRKWRDECPHLVLRSTFI
TGFPGETEEDFQFMLDWLKEAQLDRVGCFKYEPVEGATANDLPGAVPEEVKQERWERFME
TQKAISAERLQQKVGYTLGVLIDEVDEDGAIGRSYADAPEIDGNVFLNGETGLKPGDMVD
VTIEHADEYDLWGSVERDL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccccgaaggtcggcatcgtcagcctcggctgcccgaaggcgctcgtcgattca
gagcgtatcctgacccgcctgcgcgcggaggggtacgagatctcccccagctacgacggc
gcggacgtcgtgctggtcaacacctgcggcttcctcgacagcgccaagaaggagtcgctg
gacgccatcggcgaggcgatcaaggagaacgggcgggtcatcgtcaccggctgcatgggc
gtggaatcggacatgatccggcagatccaccccgacgtgctggccgtgaccggtccgcac
cagtatgaacaggtggtcagcgcggtgcatgacgccgtgccgccgacacacaaccccttc
accgatctggtgccgccggaaggcctgcggctgaccccgcgccactacgcgtatctgaag
atttccgaaggctgcaacaaccgctgcagcttctgcatcatcccgtccctgcgcggcgat
ctggtcagccggccgatccattcggtcctgcgcgaggcggaaaagctggcggtcgccggc
gtcaaggaactgctggtcatctcccaggacaccagcgcctacggcgtcgacgtcaagtac
aagacggagaaatggtacgaccgcgaggtccgcacccgcttcttcgacctgtgcaacgag
ctggcgaacttcgacctgtgggtccgcctgcattacgtctacccctacccgcatgtcgac
gaggtcatcccgctgatggcggagggcaggatcctgccctatctcgacatcccgttccag
catgcctcgcccaccgtcttgaaggcgatgcgccgcccggccgcccaggaaaagcagctg
gaccgcatccgcaaatggcgcgacgagtgcccgcatctggtgctgcgctccaccttcatc
accggcttccccggcgaaacggaggaggacttccagttcatgctggactggctgaaggaa
gcccagctcgaccgcgtcggctgcttcaagtacgagccggtggagggtgcgaccgccaac
gacctgcccggcgccgtcccggaagaggtcaagcaggagcgctgggagcgcttcatggag
acgcagaaggcgatcagcgccgaacggctccagcagaaggtcggctacacgctgggcgtg
ctgatcgacgaggtcgacgaggacggcgccatcggccgctcctacgccgacgcgccggaa
atcgacggcaacgtcttcctgaacggcgaaaccggcctgaagccgggcgacatggtcgac
gtcacaatcgagcatgccgacgagtatgatttgtggggcagcgtcgagcgcgacctgtaa
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