Azospirillum sp. TSH100: E6C72_30265
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Entry
E6C72_30265 CDS
T09516
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
azs
Azospirillum sp. TSH100
Pathway
azs02010
ABC transporters
azs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
azs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
E6C72_30265
03070 Bacterial secretion system
E6C72_30265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
azs02000
]
E6C72_30265
02044 Secretion system [BR:
azs02044
]
E6C72_30265
Transporters [BR:
azs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
E6C72_30265
Secretion system [BR:
azs02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
E6C72_30265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
Peptidase_C39
ABC_ATPase
AAA_22
AAA_16
AAA_29
SbcC_Walker_B
AAA_25
AAA_30
RsgA_GTPase
MMR_HSR1
DLIC
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QCG92091
LinkDB
All DBs
Position
p1:complement(19588..21804)
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AA seq
738 aa
AA seq
DB search
MPDASTTVAPPPPGPDATPDRDESTALRCLTLVARHHGLSASPAALRARVAPGRGEPSTA
DLLRIAAATGFKATARRLDWKALQALPPVFPLLARLSNGNTVILVGLSRPPNAAGDPAEE
PMVGVVDPLADRLDVIDVPRDRFLERWDGELVFLKPRHGLADPRQPFGLRWFVPEILRQK
SAFRDVVVAALVLHALALAVPVYFQIVIDKVLVNETVATLQVLTIGVLAALLFEAAFRFL
RQFILLAAANRIDIRLLNRTFGHLLDLPITFFDGHSAGVTVRHMQQVERIREFLTGNLLS
TVLDSLVLLVFLPVLFFYSVKLTLVALLFAGLIAGVVVALVPVYRSRLRDLYNADAERQA
MLVETIHGMRTVKSSALEPQQRRSWDRKAARAVTSHYRVGRISIAARTVTEFLEKAMMVA
VVAVGAFDVFDRQLSVGALIAFQMLSGRVVTPLVQIVSLIHQYQETALSVRMLGEVMNHP
AEPRREGSGACPALVGRIEIEGLGFRYDRNRPAALDGVTLTVPAGSVVGLVGRSGSGKST
LMRLLQGFYPVQEGSIRYDGLDIRELDLAHLRRSIGVVLQENFLFRGTIRDNIAMTMPEA
SREEIVEAARLAGADEFIHRLPDGYDTLVEEGASNLSGGQKQRIAIARALLPQPRLLILD
EATSALDPDSEAIVMANLRRIAQGRTVLIVTHRLSTLTGCDTIAVLEQGRLLDLAPHPLL
LDRCAEYRHLWQQQNRGR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgccagcacgaccgtcgcgccgcctccacccggtccggacgctactcccgac
cgcgacgaaagcaccgcgctacgctgcctgacgctggtggcgcgccaccatggcctgtcg
gcctcgccggccgccctgcgcgcccgcgtcgccccaggtcgcggtgagccctccaccgcc
gacctgctgcgcatcgccgccgccaccggcttcaaggcgaccgcccgccggctggactgg
aaagccttgcaggcccttccccccgttttcccgctgctggcccggctgtccaacggcaac
accgtcatcctggtcgggctgtcgcgtccgcccaatgccgctggcgatccggccgaggaa
ccaatggttggcgtcgtcgatccgctggccgaccggctggatgtgatcgacgtgccgcgc
gaccgcttcctggagcgctgggacggcgagctggtcttcctcaagccgcgccacggcctt
gccgacccgcgccagcccttcggcctgcgctggttcgtgccggagatcctgcgccagaaa
tccgccttccgcgacgtggtggtggcggcgctggtcctgcacgccctcgcgcttgccgtc
ccggtctatttccagatcgtgatcgacaaggtgctggtgaacgagaccgtcgccacgctt
caggtgctgaccatcggcgtgctggccgccctgctgttcgaggcggccttccgcttcctg
cgccagttcatcctgctggcggcggccaaccgcatcgatatccgtctgttgaaccgcacc
ttcggccatctgctcgacctgccgatcaccttcttcgacgggcattcggccggcgtcacc
gtgcgccacatgcagcaggtcgagcgcatccgcgagttcctgaccggcaacctgctgtcc
accgtgctcgacagcctggtgctgctggtcttcctgccggttctgttcttctattcggtc
aagctgacgctggtggcgctgctgttcgccggcctgatcgccggggtggtggtcgcgctg
gtgccggtctaccgcagccgcctgcgcgacctctacaacgccgacgccgagcggcaggcc
atgctggtggagaccatccatggcatgcgcaccgtcaagtcctcggcactcgaaccgcag
cagcgccgcagctgggaccgcaaggccgcccgcgcggtgaccagccattaccgggtcggc
cgcatctccatcgccgcccgcacggtgacggagttcctggagaaggcgatgatggttgcg
gtggtcgccgtcggcgccttcgacgtcttcgaccgccagctgtcggtcggcgcgctgatc
gccttccagatgctgtcgggccgggtggtgacgccgctggtccagatcgtctcgctgatc
caccagtatcaggaaacggcgctctcggtgcgcatgctgggcgaggtgatgaaccacccg
gccgaaccgcggcgcgagggcagcggcgcctgccccgccctggtcggccgcatcgagatc
gaggggctgggcttccgctacgaccgcaaccgcccggcggcgctggatggcgtcacgctg
accgtgccggccggctcggtcgtcgggctggtcgggcgcagcggctcgggcaagagcacg
ctgatgcggctgctccagggcttctacccggtgcaggagggcagcatccgctatgacggg
ctcgacatccgcgagctggatctggcccatctgcgccgctccatcggcgtggtgctgcag
gagaatttcctgttccgcggcaccatccgcgacaacatcgccatgaccatgccggaggcc
agccgcgaggagatcgtcgaggccgcccggctggccggggccgacgagttcatccaccgc
ctgcccgacggctacgacacgctggtggaggagggggcgagcaacctgtccggcggccag
aagcagcgcatcgccatcgcccgcgccctgctgccgcagccgcgcctgctgatcctcgac
gaggcgaccagcgcgctcgaccccgacagcgaggccatcgtcatggccaacctgcggcgc
atcgcccagggccgcaccgtgctgatcgtcacccaccggctgtcgaccctgaccggctgc
gacaccatcgccgtgctggagcagggccgcctgctcgacctcgccccccatcccctcctg
ctcgaccgctgcgccgaataccggcatctgtggcagcagcagaaccgggggcgctga
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