Azospirillum sp. TSH58: TSH58p_06220
Help
Entry
TSH58p_06220 CDS
T05449
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TSH58p_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azt03021
]
TSH58p_06220
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_06220
Enzymes [BR:
azt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TSH58p_06220
Transcription machinery [BR:
azt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TSH58p_06220
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TSH58p_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
MR_MLE_C
Motif
Other DBs
NCBI-ProteinID:
AWJ83154
UniProt:
A0A2S1XFE2
LinkDB
All DBs
Position
complement(576235..577254)
Genome browser
AA seq
339 aa
AA seq
DB search
MALQKNWQELIKPNKLDIQPGDDADRVATVVAEPLERGFGLTLGNALRRVLLSSLQGAAV
TAIHIDGVLHEFSSIPGVREDVTDIVLNIKSMGLRMGGDGPKRMRLRAEGPGEVKAGMIE
TGADIQVMDPDLVICTLDSGARLNMELTVETGKGYVPASQNRPEDAPIGLIPVDALFSPV
RKISYKVDNARVGQVTDYDRLSMVVETNGAVKPDDAVALAARILQDQLQLFINFEEPTHA
VAEEKHEEVPFNKNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEIPNWPPENIEELAKRLEEPY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggctcttcagaagaactggcaggaactgatcaagccgaacaagctggacatccagccc
ggtgacgacgccgaccgcgtggcgaccgtcgtggccgagccgctggagcgtggcttcggt
ctgacgctcggcaacgcgctgcgccgcgtgctgctctcctcgctgcagggtgcggccgtg
acggcgatccacatcgacggcgtgctgcacgagttctcctcgatccccggcgtgcgcgag
gatgtgaccgacatcgtcctcaacatcaagtcgatgggtctgcgcatgggcggtgacggc
ccgaagcgcatgcgcctgcgcgccgaaggccccggcgaggtgaaggccggcatgatcgag
accggcgcggacatccaggtgatggacccggacctcgtgatctgcacgctggattccggc
gcccgtctgaacatggaactgacggtcgagaccggcaagggctacgtcccggccagccag
aaccgtccggaggacgccccgatcggcctgatcccggtcgacgcgctgttctcgccggtc
cgcaagatctcctacaaggtcgacaacgcccgcgtcgggcaggtcaccgactatgaccgc
ctgtcgatggtcgtcgagaccaacggcgccgtgaagccggacgacgcggtggcgctcgcc
gcccgcatcctccaggaccaactgcagctgttcatcaacttcgaggagccgacccacgcg
gtcgccgaggagaagcacgaggaggttccgttcaacaagaacctgctccgcaaggtggac
gagctggaactgtcggtccgttcggccaactgcctcaagaacgacaacatcgtctacatc
ggcgatctggtgcagaagacggaggcggagatgctccgcaccccgaacttcggccgcaag
tcgctgaacgagatcaaggaagtgctggcccagatgggtctgcacctcggtatggaaatc
ccgaactggccgcccgagaacatcgaagagctggccaagcgtctggaagagccgtactaa
DBGET
integrated database retrieval system
