Azospirillum sp. TSH58: TSH58p_08235
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Entry
TSH58p_08235 CDS
T05449
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
azt
Azospirillum sp. TSH58
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
azt03000
]
TSH58p_08235
Transcription factors [BR:
azt03000
]
Prokaryotic type
Helix-turn-helix
Other families
TSH58p_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
AAA_5
HTH_8
PAS_9
PAS
PAS_4
AAA
IstB_IS21
HTH_23
nSTAND6
AAA_3
Mg_chelatase
AAA_2
AAA_22
HTH_29
AAA_16
HTH_50
HTH_Tnp_ISL3
HTH_1
HTH_30
nSTAND3
PAS_8
Torsin
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AWJ83516
LinkDB
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Position
complement(1012088..1014022)
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AA seq
644 aa
AA seq
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MENAKAAHINELVRVSEGIASKRDAIITASWRRCVADYKLDPTVRREAYILPHERLCLHR
DAMDEFLRMARFGLEALYHQVAGMGYALLLTDSNGVTVDFIGDRASDDDLRRTGLYLGAD
WNEGRAGTCAVGTCIATGEALTVHQTDHFDATHIPLTCTAAPVFHSGGGLAAVLDISALR
SPEPKISQYLALQLVKAFTHKIENANLYNNFRREWVVKLSASQEFAEVDPDFVIALDGAG
RIIGFNHRACRLLAGEGEDREHLIGRSFSDLFDCQVDDLVRFVRSLPTDQRTLRLRRSGT
PLFAQAMPPPAIAVPRPSKGDEGSLPKPLQAMCGGDPALKAVLTRAAKLVNTRMSLLIHG
ETGTGKEHLAKALHQSSVRASKPFVAVNCAALPEALIESELFGHEPGSFTGATSRGKKGL
ILEADGGTLFLDEIGDMPLSSQTRLLRVLAEREVTPIGRTKAVSVDVRVIAATHRDLVKL
IKAGTFRDDLYFRLNGAVFTVPPLRQRGDLDWLIDRLLAERTERDGIGYTIAAPALAALR
AHGWPGNVRELVNALDYACAVCTDGLIELMDIPDPVQRSGVFEAWPSGPPTPAPDSDDPA
IRLREVLRRLHWNVSAAARDMGVDRSTVHRQMRRFGIVPPHRLD
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgccaaagcggcgcacatcaacgaattggtccgcgtctcggaagggatcgcg
tcgaagcgcgacgccatcatcaccgcatcctggcgccggtgcgtggccgattacaagctg
gatccgaccgtccggcgggaggcctacatcctgccgcacgagcgtctgtgcctgcaccgc
gacgcgatggacgaattcctgcgcatggcccgcttcgggctggaggccctgtatcatcag
gtggccggcatgggctacgccctgctgctgaccgacagcaacggcgtcaccgtcgacttc
atcggcgaccgggcgtcggacgacgacctgcgccggaccggcctctatctcggcgcggac
tggaacgagggacgggccggcacctgcgcggtcggcacctgcatcgccacgggcgaggcg
ttgaccgtccaccagacggaccatttcgacgcgacccacattcccctcacctgcacggcg
gctccggtgttccacagcggcggcgggcttgcggcggtgctggacatctccgcgctccgt
tcgccggagcccaagatcagccagtatctggccctccaactggtcaaggccttcacgcac
aagatcgaaaacgccaacctctacaacaatttccgccgggagtgggtggtcaagctctcc
gcctcccaggagtttgcggaagtcgatccggacttcgtgatcgcgctggacggcgccggg
cggatcatcggcttcaatcaccgcgcgtgtcgactgctggccggcgagggggaggaccgg
gagcatctcatcggacggtccttctccgacctcttcgactgtcaggtggacgacctggtg
cggttcgtgcgctctctgcccaccgaccagcgcaccctccgcctgcggcgcagcgggaca
cccctgttcgcgcaggcgatgccgccgccggccatcgccgttccacgcccatccaaagga
gacgagggaagcctgcccaagccgctccaggcgatgtgcggcggtgatccggcgctgaaa
gcggtgttgacgcgcgcggcgaagctggtgaacacgcggatgagcctgctgatccacggc
gagaccggcaccggcaaggaacacctcgccaaggccttgcaccagtcgagcgtgcgcgcg
tccaagcctttcgtcgccgtgaactgcgccgcgctgccggaggcgctgatcgagagcgag
ttgttcggccatgagcccggctccttcaccggggccacgtcgcggggcaagaaggggctg
atcctggaggcggacggcggcacgctgttcctggacgagatcggcgacatgccgctgtcc
tcgcagacacgcctgctgcgcgtcctggcggagcgggaggtcacacccatcggccgcacc
aaggcggtgtcggtggacgtgcgcgtcattgccgcgacccaccgcgatctggtcaaactg
atcaaggcggggacgttccgcgacgacttgtatttccgtctcaacggcgcggtgttcacc
gtgccgccgctgcgccagcgcggcgacctcgactggctgatcgaccggctgctggccgag
cggacggagcgggacggcatcggctacaccatcgccgctccggcgctggccgccttgcgc
gcccacggctggcccggcaacgtgcgcgaactggtgaacgcgctcgactacgcctgcgcg
gtctgcaccgacgggctgatcgaactgatggacattcccgaccccgtgcagcgcagcggc
gtgttcgaggcgtggccgtcgggccctccgacgcccgccccggacagcgacgatcccgcc
atccgcctgcgcgaggtgttgcgccgcctgcactggaacgtgtcggcggcggcgcgggac
atgggcgtggaccgctcgaccgtccaccgccagatgcgccgtttcggcatcgtcccgccg
caccggctggattga
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