Azospirillum sp. TSH58: TSH58p_09570
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Entry
TSH58p_09570 CDS
T05449
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt03030
DNA replication
azt03430
Mismatch repair
azt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TSH58p_09570
03430 Mismatch repair
TSH58p_09570
03440 Homologous recombination
TSH58p_09570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azt03032
]
TSH58p_09570
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_09570
Enzymes [BR:
azt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TSH58p_09570
DNA replication proteins [BR:
azt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TSH58p_09570
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TSH58p_09570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
RNase_H_2
PAS_4
PAS_8
DUF5927
PAS_9
Motif
Other DBs
NCBI-ProteinID:
AWJ83752
UniProt:
A0A2S1XH22
LinkDB
All DBs
Position
1295476..1297683
Genome browser
AA seq
735 aa
AA seq
DB search
MSAPATTGSAGTAAPATAPAEPRRIIPLAFRAAGVGLPLLSVGAAVGFSANGDPNAFVTY
AVTMTAAMTAGVWGLWSLVDRRLLRASETLSREAGLIAHGAADGKTGARIPLARYGDLAP
VAKAVNELSDKLSAARRDTARIVAESTAKAEEQKTRLAAVLRDLHEGVLVCNLKHQILLY
NQTALDILHLAGDLGLGRSLLHFVVAEPVTHTLERLTLRVREGRHVNHEHGTTAQFVGAT
TDGHILLAGRMSAILQDPPEGSDEPPTITGYVITLSDATSELAALGQRDALLREATEGFC
APIANLRAVLETLDDTPELGPEERAAFQAALMDSSNTLSERLARVTNAYRSVVTGSWPMS
DIHSTNLINLIRHRVGPDAQYGVTLTGLPQWVHGDSYSLVILFGYLIEYVYALTGVPAYD
LSVEPGDSWVYLDITWRGPSVPSGIVDSWLDHPLPDALGGLTVGDVLQHHKSTMWSEPVK
GPGSDDELLSRLRVPLPPALKPPSAHTAARGGARPEFFDFNLLHQPLATSELGRTPLDQL
HYVVFDTETTGLSPSTGDEIIQIAAVRVVGGRILTGETFNTLVNPKRSIPAESIPFHGIT
DAMVADKPTIDKVLPQFRGFVSGAVLIAHNAAFDLKFLKMKERASGVRFDSPVLDTMLLS
RMLLGEGGDHTLDGIAERLGIEVVDRHTALGDSLVTAAVFLRMVEMLKERDVRTLDDAIR
GANIIVELAARERAF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccggcgaccaccggaagcgccggaaccgccgctccggcgaccgccccggcg
gagccccggcggatcatcccgctggccttccgcgccgccggcgtcggcctgcccctgctg
tcggtgggggccgcggtcggcttcagcgcgaacggcgacccgaacgccttcgtcacctac
gccgtcaccatgaccgccgccatgaccgccggggtctggggcctgtggagtctggtcgac
cggcggctgctgcgcgcctcggagacgctgagccgcgaggccgggctgatcgcccatggc
gccgccgacggcaagaccggcgcgcgcatcccgctggcccgctacggcgacctcgccccg
gtggccaaggcggtcaacgagctgtcggacaagctgtccgccgcccgccgcgacaccgcc
cgcatcgtcgcggagtcgaccgccaaggcggaggagcagaagacgcggctggccgccgtc
ctgcgcgacctgcacgaaggcgtgctggtctgcaacctcaagcaccagatccttctctac
aaccagacggcgctcgacatcctgcatctggccggcgacctcgggctgggccgctccctg
ctgcatttcgtggtggcggagccggtcacccacacgctggagcggctgacgctccgcgtc
cgcgaggggcggcacgtcaaccacgagcacggcaccaccgcccagttcgtcggcgccacc
acggacgggcacatcctgctggccgggcgcatgagcgccatcctgcaggacccgccggaa
ggctcggacgagccgccgaccatcaccggctacgtcatcaccctgtccgacgcgaccagc
gagctggccgcgctgggccagcgcgacgccctgctgcgcgaggcgacggagggcttctgc
gcgcccatcgccaacctgcgcgccgtgctggagacgctggacgacacgccggaactaggg
ccggaggagcgcgccgctttccaggccgcgctgatggactcctccaacaccctgtcggag
cggctggcccgcgttaccaacgcgtaccgcagcgtcgtcaccggctcctggccgatgagc
gacatccactccaccaacctgatcaacctgatccgccaccgggtcgggccggacgcccag
tacggcgtgacgctgaccggcctgccgcaatgggtgcacggcgacagctacagcctcgtc
atcctgttcggctatctgatcgaatacgtctacgcgctgaccggggtccccgcctacgac
ctgtcggtggagcccggggacagctgggtctatctcgacatcacctggcgcggcccgtcg
gtgcccagcggcatcgtggacagctggctcgaccacccgctgcccgacgcgctgggcggc
ctgaccgtcggcgacgtgcttcagcaccacaagagcacgatgtggagcgagccggtgaag
gggccgggatcggacgacgagctgctgtcgcgcctgcgcgtgccgctgccgccagcgctg
aagccgccgtcggcccacacggcggcgcgcggcggggcgcggccggagttcttcgacttc
aacctgctgcaccagccgctggccaccagcgagcttggccgcacgccgctcgaccagctc
cattacgtcgtcttcgacaccgagacgaccggcctgtcccccagcaccggcgacgagatc
atccagatcgccgccgtgcgcgtcgtcggcgggcgcatcctgaccggcgagaccttcaac
acgctggtcaacccgaagcggagcatcccggcggaatcgatccccttccacggcatcacc
gacgcgatggtggccgacaaaccgaccatcgacaaggtgctgccgcagttccgcggcttc
gtgtcgggcgccgtgctgatcgcccacaacgccgccttcgacctgaaattcctgaagatg
aaggaacgggcgtcgggcgtgcgcttcgacagcccggtgctcgacaccatgctgctgtcg
cggatgctgctcggcgagggcggcgaccacacgctggacggcatcgccgagcggctgggg
atcgaggtggtggaccgccacacggcgctgggcgacagcctcgtcaccgccgcggtcttc
ctgcgcatggtggagatgctcaaggaacgcgacgtccgcacgctcgacgacgccatccgc
ggcgccaacatcatcgtcgagctggcggcgcgggagcgcgccttttga
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