Azospirillum sp. TSH58: TSH58p_10310
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Entry
TSH58p_10310 CDS
T05449
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TSH58p_10310 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azt03019
]
TSH58p_10310 (groL)
03110 Chaperones and folding catalysts [BR:
azt03110
]
TSH58p_10310 (groL)
03029 Mitochondrial biogenesis [BR:
azt03029
]
TSH58p_10310 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
azt04147
]
TSH58p_10310 (groL)
Enzymes [BR:
azt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TSH58p_10310 (groL)
Messenger RNA biogenesis [BR:
azt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TSH58p_10310 (groL)
Chaperones and folding catalysts [BR:
azt03110
]
Heat shock proteins
HSP60 / Chaperonin
TSH58p_10310 (groL)
Mitochondrial biogenesis [BR:
azt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TSH58p_10310 (groL)
Exosome [BR:
azt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TSH58p_10310 (groL)
Exosomal proteins of other body fluids (saliva and urine)
TSH58p_10310 (groL)
Exosomal proteins of breast cancer cells
TSH58p_10310 (groL)
Exosomal proteins of colorectal cancer cells
TSH58p_10310 (groL)
Exosomal proteins of bladder cancer cells
TSH58p_10310 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TetR_C_41
Motif
Other DBs
NCBI-ProteinID:
AWJ83876
LinkDB
All DBs
Position
complement(1455065..1456708)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGATAREKMLRGVDILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVSVAKEI
ELSDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVREGVKSVAAGMNPMDLKRGI
DLAVETVVADIRGRAKKVTTNDEIAQVGTISANGEAEIGKMIAQAMEKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYLSPYFITNADKMIADLENPFILLHEKKLSGLQALLPVLEAV
VQSSRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDMAILTGGQV
ISEDLGIKLENVTIDMLGTAKKVVISKENTTIVDGAGSAEDIQARIGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGVVAGGGTALL
YATKALDALKPINDEQRVGIEIIRRALQAPVRQIAYNAGTDGSIVVGKLLDQNDANFGYD
AQKGEFTDLVAAGIIDPVKVVRTALQDAASIAGLLITTEAMIAEKPEKKAAPAGMPGGMD
DMGGMGF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggaagttaagttcggcgctaccgcgcgcgaaaagatgctgcgcggtgtg
gacatcctcgccgacgccgtgaaggtgacgctgggtccgaagggccgcaacgtcgtgatc
gagaagtccttcggcgctccgcgcatcaccaaggacggcgtctcggtcgccaaggaaatc
gagctgtcggacaagttcgagaacatgggcgcccagatggtgcgtgaggtcgcgtcgaag
acgaacgacctggccggcgacggcaccaccacggcgaccgttctggcccaggccatcgtc
cgcgagggcgtgaagtcggtggccgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgccgtcgagaccgtcgtggccgacatccgcggccgcgccaagaaggtcacgacc
aacgacgagatcgcccaggtcggcaccatctccgccaacggcgaagccgagatcggcaag
atgatcgcccaggccatggagaaggtcggcaacgagggcgtcatcacggtggaagaggcc
aagagcctcgagaccgagctggacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaccaacgccgacaagatgatcgcggacctcgaaaacccgttcatc
ctgctgcacgagaagaagctgtcgggtctgcaggccctgctgccggtcctcgaggccgtc
gtgcagtcctcgcgtccgctgctgatcatcgccgaggacgtcgagggcgaggccctggcg
accctggtcgtgaacaagctgcgtggcggcctgaaggtcgccgccgtcaaggccccgggc
ttcggtgaccgccgcaaggcgatgctggaggacatggccatcctgaccggcggccaggtc
atctccgaggatctcggcatcaagctcgagaacgtcaccatcgacatgctgggcaccgcc
aagaaggtcgtgatctccaaggagaacaccaccatcgtcgacggcgccggctcggccgag
gacatccaggcccgcatcggccagatcaaggcgcagatcgaggagaccacctcggactac
gaccgcgagaagctgcaggagcgtctggcgaagctggccggcggcgttgccgtcatccgc
gtcggcggcgccaccgaggtcgaggtgaaggagcgcaaggaccgcgttgacgacgccatg
cacgccacccgcgccgcggtggaagagggtgtggtcgccggcggcggtaccgccctgctg
tacgccaccaaggccctggacgccctgaagccgatcaacgacgagcagcgcgtcggcatc
gagatcatccgccgcgccctgcaggccccggtccgtcagatcgcctacaacgcgggcacc
gacggttcgatcgtggtcggcaagctgctggaccagaacgacgccaacttcggctacgac
gcccagaagggtgagttcaccgatctggtcgccgccggcatcatcgacccggtgaaggtg
gttcgcaccgccctgcaggacgcggcctcgatcgccggcctgctgatcaccaccgaggcg
atgatcgccgagaagccggagaagaaggctgctccggccggcatgccgggtggcatggac
gacatgggcggcatgggcttctaa
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