Azospirillum sp. TSH58: TSH58p_11420
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Entry
TSH58p_11420 CDS
T05449
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TSH58p_11420 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azt03019
]
TSH58p_11420 (pnp)
03016 Transfer RNA biogenesis [BR:
azt03016
]
TSH58p_11420 (pnp)
Enzymes [BR:
azt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TSH58p_11420 (pnp)
Messenger RNA biogenesis [BR:
azt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TSH58p_11420 (pnp)
Transfer RNA biogenesis [BR:
azt03016
]
Prokaryotic type
tRNA degradation factors
TSH58p_11420 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AWJ84077
LinkDB
All DBs
Position
1691887..1694010
Genome browser
AA seq
707 aa
AA seq
DB search
MFKVFRKEIEWGGRKLTFETGKIARQADGAVLVTYGETTVLCTVVGAKSPKPGVDFFPLT
VNYQEKSFAAGKIPGGFFKREGRPTEKETLVSRLIDRPIRPLFADGFRNETQVICTVLSH
DLENDPDIVAMVGTSAALTISGIPFLGPIGAARVGYIDGQYVLNPTMDAVDGSALDLVVA
GTQDGVLMVESEAKELSEEVMLGAVMFGHSGFQPVIDAIIDLAEECAKEPWDLPEPAYDR
AALKAKLRATVGADVEAAYTETVKQVRYEKIGAAKAKALEALAEAHETQAIVTEFKELEA
DILRGAVLKTGRRIDGRDTKTVRPIVSEVGVLPRAHGSALFTRGETQALVVTTLGTSQDE
QIIDALQGEYREHFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPLLPKKEDFP
YTLRVVSEVTESNGSSSMATVCGTSLSLMDAGAPLARPVAGIAMGLIKEDDGFAVLSDIL
GDEDHLGDMDFKVAGTDAGITALQMDIKITSITEEIMKIALGQAKDGRLHILGEMSKALT
GAREAVNENAPRITVINIPKEKIRDVIGSGGKVIREIVEQTGAKIDIEDDGTVKVAAVDT
KAAQAAIDWIKGIVAEPEMNVVYTGKVVKVVDFGAFVNFLGSRDGLVHISELAQQRVGKV
SDVVSQGDSVKVKVIGFDDRGKVKLSMKQVDQATGEDLTKKDAPAAQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaggttttccgcaaagaaatcgaatggggtggacgcaagctgacgttcgagacg
ggcaagatcgcccgtcaggccgacggcgcggtgctggtcacctatggtgagaccacggtc
ctctgcacggtcgtcggcgccaagtcgccgaagccgggcgtcgatttctttccgctgacg
gtcaattaccaggaaaagtccttcgcagccggcaagattcccggcggcttcttcaagcgt
gaaggccgtccgacggagaaggagacgctggtcagccgcctgatcgaccgtcccatccgt
ccgctgttcgccgatggcttccgcaacgagacgcaggtcatctgcaccgtgctgagccac
gatctggagaacgatccggacatcgtcgcgatggtcggcacctccgccgcgctgacgatc
tccggcatcccgttcctgggtccgatcggcgccgcccgcgtcggctacatcgacggccag
tatgtgctgaacccgaccatggacgccgttgacggttccgcgctcgacctcgtggtcgcc
ggcacccaggacggcgtgctgatggtcgaatcggaagccaaggagctgtccgaggaggtc
atgctgggcgccgtgatgttcggtcacagcggtttccagccggtcatcgacgccatcatc
gatctggccgaagagtgcgccaaggagccgtgggacctgccggagccggcctacgaccgc
gccgcgctgaaggcgaagctgcgcgcgaccgtcggcgccgacgtggaggccgcctacacc
gagacggtcaagcaggtccgctacgagaagatcggcgccgccaaggcgaaggcgctggag
gctctggccgaggcccatgagacccaggcgatcgtgaccgagttcaaggagctggaggcc
gacatcctgcgcggcgccgttctgaagaccggccgccgcatcgacggccgcgacaccaag
acggtccgcccgatcgtgtcggaggtcggcgtgctgccgcgcgcccatggttcggcgctg
ttcacccgcggcgagacgcaggcgctggtcgtcaccacgctgggcaccagccaggacgag
cagatcatcgacgcgctgcagggcgagtaccgcgagcatttcatgctccactacaacttc
cctccgtactcggtgggcgaggccggccgcatgggctcgccgggccgccgcgagatcggc
catggcaagctggcgtggcgcgccatccacccgctgctgccgaagaaggaagacttcccc
tacacgctccgcgtggtgtcggaagtgaccgagtccaacggctcgtcgtcgatggcgacg
gtctgcggcacctcgctgtcgctgatggacgccggcgctccgctggcgcgcccggtggcc
ggcatcgccatgggcctgatcaaggaggacgacggcttcgcggtcctgtcggacatcctg
ggtgacgaggatcacctgggcgacatggacttcaaggtggccggcaccgacgcgggcatc
accgcgctccagatggacatcaagatcacctcgatcaccgaggagatcatgaagatcgcc
ctgggccaggccaaggacggccgcctgcacatcctgggcgagatgtccaaggccctgacc
ggcgcccgcgaggcggtgaacgagaacgccccgcgcatcaccgtgatcaacatcccgaag
gagaagatccgcgacgtgatcggctccggcggcaaggtgatccgcgagatcgtggagcag
accggcgccaagatcgacatcgaggacgacggcacggtgaaggtggccgcggtggacacc
aaggccgcccaggccgccatcgactggatcaagggcatcgtcgccgagccggaaatgaac
gtcgtctacaccggcaaggtcgtgaaggtcgtcgatttcggcgccttcgtgaacttcctg
ggttcccgcgacggcctcgtccacatctccgagctggcgcagcagcgcgtcggcaaggtg
tcggacgtggtgtcgcagggtgactcggtgaaggtgaaggtcatcggcttcgacgaccgc
ggcaaggtgaagctgtcgatgaagcaggtcgatcaggccaccggcgaagacctgaccaag
aaggacgctccggcggcgcagtag
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