Azospirillum sp. TSH58: TSH58p_12225
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Entry
TSH58p_12225 CDS
T05449
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
azt
Azospirillum sp. TSH58
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_12225 (addB)
Enzymes [BR:
azt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TSH58p_12225 (addB)
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TSH58p_12225 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AWJ84225
UniProt:
A0A2S1XI82
LinkDB
All DBs
Position
complement(1865880..1868858)
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AA seq
992 aa
AA seq
DB search
MSGRAEPKVYSIPTGVSFVDQLAAGILDRVGNDPLALAGVTVLLPTRRSCRSLREAFLRR
SGGQPMLLPRMSPLGELDAASLSLTSAEELPGVPLELPDPISGLKRQMMLARLILQATGV
SATTAQAVRLGADLGRLIDAVWTENVAFDRLASLVPEDYAQHWQVTLEFLKIVTEHWPAI
LGASALTDPAQRRNLVLETQAALWRAEPPQGLVIAAGSTGSIPASADLLAVVAALPQGAV
VLPGLDLEADEASWDAIRADESHPQYGLAHLLDRLSVGRAAVRRWNDAEEPRAARARLLA
EAMRPAATTESWRELDGLDAAALDGLTRIDAPTAEEEASVIALLMRHALETPGKTAALVS
PDRNLARRVAMALTRWGIAVNDSAGQPLVHTAVGTYLRLTAELAASRAHPLALLALAKHP
LAAGGHDPAEFRRSARALERTVLRGPRPAEGFAGLIAALKATDRFDHPDQQATLLGWLEN
LETLAAPFMEVLFSEAPLSDLVRAHVAFAEALASRTDAPGSEFLWRQDDGEEAATFVHEL
LEATEGFPAVPGTDYPALLDALMAMRPVRPRFGLHPRLYILGPMEARLQHFDLLILGGLN
EGTWPPDPGADPWMSRPMRRDFGLPSPERMVGLSAHDFTHACGAEEVVLTRAERVDGTPT
VPSRWLLRLETVLRALGLDGRIELAGEPWLAWARGLDEPDAVRPVAPPEPRPPVAARPRK
LSVTKIEKWMRDPYAIYAEHVLRLRKLDPIAADPGAADRGQFIHAALDAFVKAHSGQLPD
DALHRLLAMGRESFGPLLHSHPDVWAFWWPRFERIAEWFVGQERDRRRTLKPLATEVSGE
LALNGPAGPFLLTAKADRIDSGGAGLVLIDYKTGTPPSTREIELGFAPQLPLEAAMAEAG
GFAGVAKNRVAELAFWRLSGGDPPGEEKAVKGDPATLAAEARAGLEELIRHFDDPATPYR
SCPRPAMAPRYTDYAHLARVQEWSAGGDGGEG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcagggcggagcccaaggtctattcgattcccaccggcgtgtccttcgtggac
cagctcgccgcgggcatcctggaccgtgtggggaacgacccgctggcgctggccggggtg
accgtcctgctgccgacgcgccgctcctgccgctcgttgcgcgaggcgttcctgcgccgc
tccggcggacagccgatgctgctgccacggatgagcccgctgggcgagctggacgccgcc
tcgctcagcctgacctcggcggaggagctgcccggcgtgccgctggagctgcccgacccg
atcagcgggctgaagcgccagatgatgctggcccggctgatcctccaggcgaccggcgtg
tcggccaccaccgcgcaggcggtgcggctgggcgccgacctggggcggctgatcgacgcg
gtgtggacggagaacgtcgccttcgaccggctggcctcgctggtgccggaggattacgcc
cagcactggcaggtgacgctggagttcctgaagatcgtcaccgagcactggcccgccatc
ctcggagccagcgcgctgaccgacccggcgcagcgccgcaacctcgtgctggagacgcag
gccgcgctctggcgggcggagccgccgcaggggctggtcatcgccgccggctccaccggc
tcgatcccggcctccgccgacctgctggcggtggtcgccgccctgccgcagggggccgtc
gtgctgcccggcctggacctggaggccgacgaggcgagctgggacgccatccgcgccgac
gaatcgcacccgcaatacggcctcgcccatctgctggaccggctgtcggtcggccgcgcc
gccgtccgccgctggaacgacgcggaggagccgcgggcggcccgcgcccgcctgctggcc
gaggcgatgcgccccgccgccaccacggaaagctggcgggagctggacgggctggacgcc
gcggccctggacgggctgacccgcatcgacgccccgaccgcggaggaggaggcgtcggtc
atcgcgctgctgatgcgccacgcgctggaaacgccgggcaagacggcggcgctggtctcc
cccgaccgcaacctcgcccgccgggttgccatggcgttgacgcgctggggcatcgcggtc
aacgactcggcgggccagccgctggtccacaccgcggtcggcacctatctgcggctgacc
gccgagctggccgccagccgcgcccatccgctggccctgctggcgctggccaagcacccg
ctggccgccggcgggcacgacccggcggagttccgccgctccgcccgcgcgctggagcgc
accgtgctgcgcggcccccgcccggcggagggcttcgccgggctgatcgccgcgctgaag
gccaccgaccgcttcgaccacccggaccagcaggccactctgctcggctggctggaaaat
ttggagacgctcgccgcccccttcatggaggtgctgttcagcgaggccccgctcagcgac
ctcgtccgcgcgcatgtcgccttcgcggaggcgctggcctcgcgcaccgacgcgccgggg
tcggagttcctgtggcggcaggacgacggcgaggaggccgcgaccttcgtccatgagctg
ctggaggcgacggagggcttccccgccgtgccgggcaccgactatccggcgctgctcgac
gcgctgatggcgatgcgcccggtgcgcccgcgcttcggcctgcacccgcgcctctacatc
ctcggcccgatggaagcccgccttcagcatttcgacctgctgatcctgggcgggctgaac
gaggggacctggccgcccgaccccggtgccgatccctggatgtcgcgcccgatgcgccgg
gatttcggcctgcccagcccggagcgcatggtcggcctgtccgcccacgacttcacccac
gcctgcggcgcggaggaggtcgtgctgacccgcgcggagcgggtggacggcacgccgacc
gtcccgtcgcgttggctgctgcggctggagacggtgctgcgcgcgctgggtctggacggg
cggatcgagctggccggggagccctggctggcctgggcgcgcgggctggacgaaccggac
gccgtgcgccccgtcgccccgccggagccgcgcccgccggtcgccgcccgcccgcgcaag
ctgtcggtcaccaagatcgagaagtggatgcgcgacccctacgccatctacgccgagcat
gtgctgcgcctgcgcaagctcgaccccatcgccgccgatcccggcgccgccgaccgcggc
cagttcatccacgcggccctggacgccttcgtaaaggcccattccggccaactgcccgac
gacgccctgcaccggctgctggcgatggggcgcgagtccttcggcccgctgctgcacagc
catcccgacgtctgggccttctggtggccgcgcttcgagcgcatcgccgagtggttcgtc
gggcaggagcgcgaccgccgccgcaccctgaagccgctcgccaccgaagtgtcgggcgag
ctggcgctgaacggccccgccggccccttcctgctgaccgccaaggccgaccgcatcgat
tcgggcggcgcggggctggtcctgatcgactacaagaccggcaccccgccctcgacccgc
gagatcgagctgggcttcgccccgcagctgccgctggaggccgccatggccgaggccggc
ggcttcgccggggtggcgaagaaccgggtggccgagctggccttctggcgcctgtccggc
ggcgacccgccgggcgaggagaaggcggtgaagggcgacccggcgacgctggccgccgag
gcccgcgccggcctggaggagctgatccgccacttcgacgatcccgccaccccctaccgc
tcctgcccacgcccggccatggccccgcgctacaccgactacgcccacctcgcgcgggtg
caggaatggtcggcgggcggcgatgggggtgaggggtga
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