Azospirillum sp. TSH58: TSH58p_12755
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Entry
TSH58p_12755 CDS
T05449
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
azt
Azospirillum sp. TSH58
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azt03032
]
TSH58p_12755 (ihfB)
03036 Chromosome and associated proteins [BR:
azt03036
]
TSH58p_12755 (ihfB)
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_12755 (ihfB)
DNA replication proteins [BR:
azt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TSH58p_12755 (ihfB)
Chromosome and associated proteins [BR:
azt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
TSH58p_12755 (ihfB)
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
TSH58p_12755 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
XPC-binding
HU-CCDC81_bac_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AWJ84319
UniProt:
A0A2S1XIL9
LinkDB
All DBs
Position
1986923..1987207
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AA seq
94 aa
AA seq
DB search
MTKSELIQRLAERNPHLYQRDIEKIVGTIFDEISEALARGDRVELRGFGAFSVKRRDART
GRNPRTGEAVEVGEKAIPFFKTGKQLRERLNTDE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagagctgattcaacggctcgcggagcgcaatccgcatctgtaccagcgc
gacatcgaaaagatcgtcggcaccatcttcgacgagatctccgaagcgctcgcccgcggc
gaccgggtggaactgcgcgggttcggcgccttctccgtcaagcgtcgcgacgcccgcacc
ggccgaaacccgcgcacgggcgaagccgtcgaggtgggcgagaaggcgatccccttcttc
aagaccggaaaacagttgcgcgagcgcttgaacaccgacgaatga
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