Azospirillum sp. TSH58: TSH58p_13635
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Entry
TSH58p_13635 CDS
T05449
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TSH58p_13635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_13635
Enzymes [BR:
azt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TSH58p_13635
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TSH58p_13635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
HTH_20
ETF
Zn_ribbon_6
zf_Rg
SPDY
zf-CHY
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AWJ84475
LinkDB
All DBs
Position
2160183..2162435
Genome browser
AA seq
750 aa
AA seq
DB search
MRENSARSGARSGDSAQALLPGTVPVDADPRVRVLLPLPLREAYDYRVPAGMTLNPGDYV
EVPLGPRRVLGVVWGDGAGVVEAARLKPVVRRFDVPPMPEVERKFVEWVAAYTMTPPGHV
LRMAISVPSALEPAKAMLAYLRKPDAEPPPGFKMTDPRRRVLALLDDGPPRTPAELAEEA
GCGVTVVRGLAEAGLLEPVLLQPTKLGRPDCHRPGPTLSADQEAAAADLRARVESGVYST
VLLDGVTGSGKTEVYYEAIAAALKAGKQALVLLPEIALSAQWLERFARRFGAPPAEWHSE
LTGAQRRDTWRAVANGEVPVVVGARSALFLPYKNLGVIIIDEEHDSAYKQEEGSIYHARD
MAVARAHLGGIPTVLVSATPSLETKVNADSNRYARIELPGRHGGAVLPDVELVDLRKDRP
PARHWLAPSLKKAIEQTLAEKEQVMLFLNRRGYAPLTLCRACGHRLQCPNCTAWLVEHRL
ARKLQCHHCGLSQPLSPTCPECGEEGTLAACGPGVERIAEEVAELFPDARAAIMASDTLF
GPRAIQEMVRRIADHELDILIGTQVMAKGHHFPMLTLVGVVDADLGLAGGDLRAGERTYQ
LLHQVAGRAGRGERPGRVMLQTYMPEHPVMQALAAGDRDGFYQLEAEMRLEAGMPPFGRL
AALIVSGEDAAAVEKLSIALGRAAPRSDTVAVLGPAPAPLALLRGRHRRRLLLKAPRTVQ
VQPLIAQWLEQVEIPPNVRVQVDVDPYSFL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaaattccgccagatccggggccagatccggagattcagcgcaggctcttctg
ccgggcacggtgccggtggacgcggacccgcgcgtccgcgtgctgctgccgctgccgctg
cgcgaggcctacgattaccgcgtgcccgccgggatgaccctcaaccccggcgactatgtg
gaggttccgctcgggccgcgccgcgtgctcggcgtcgtgtggggcgacggcgccggggtg
gtggaggccgcccggctgaagccggtggtccgccgcttcgacgtgccgccgatgccggag
gtcgaacgcaagttcgtcgagtgggtcgccgcctacaccatgacgccgccgggccatgtg
ctgcgcatggcgatcagcgtgccctcggcgctggagccggcgaaggcgatgctcgcctat
ctgcgcaagccggacgccgagccgccgcccggcttcaagatgaccgacccgcggcgccgc
gttctcgccctgctggacgacggcccgccgcgcaccccggccgagctggcggaggaggcc
ggctgcggcgtcaccgtggtgcgcgggctggccgaggccgggctgctggagccggtgctg
ctccagccgaccaagctcgggcggcccgactgccaccgccccggcccgaccctctccgcc
gaccaggaggcggcggcggcggacctgcgcgcccgcgtggagtccggcgtctattccacc
gtgctgctcgacggtgtgaccggctccggcaagacggaggtctattacgaggccatcgcc
gccgccctgaaggcgggcaagcaggcgctggtgctgcttccggaaatcgccctgtcggcg
cagtggctggagcgcttcgcccgccgcttcggcgcgccgccggcggagtggcattccgaa
ctgaccggggcgcagcgccgcgacacctggagggccgtggccaacggcgaggtgccggtg
gtggtcggcgcccgctcggccctgttcctgccctacaagaacctcggcgtcatcatcatc
gacgaggagcacgactccgcctacaagcaggaggaggggtcgatctaccacgcccgcgac
atggccgtggcgcgggcgcatctcggcggcatccccaccgtgctggtctccgccacgccg
tcgctggagaccaaggtcaacgccgacagcaaccgctacgcccgcatcgagctgccgggc
cgtcacggcggcgccgtgctgcccgacgtcgagctggtcgacctgcgcaaggaccggccg
ccggcgcgccactggctggccccgtcgctgaagaaggccatcgagcagacgctggcggag
aaggagcaggtgatgctgttcctcaaccgccgcggctacgccccgctgaccctgtgccgg
gcctgcgggcaccggctgcaatgccccaactgcacggcgtggctggtcgaacaccggctg
gcccgcaagctccagtgccaccattgcggcctctcccagcctctctccccgacctgcccg
gaatgcggcgaggaagggacgctggccgcctgcggtcccggtgtggagcgcatcgccgag
gaggtggcggagctgttccccgacgcccgcgccgccatcatggcgtccgacacgctgttc
ggcccccgcgccatccaggagatggtccgccggatcgccgaccatgagctggacatcctg
atcggcacccaggtcatggcgaagggccaccatttccccatgctgaccctggtcggggtg
gtggacgccgatctggggctggccggcggtgacctgcgggcgggggagcggacctaccag
ctcctccatcaggtggccgggcgcgccgggcgcggcgagcggccggggcgggtgatgctg
cagacctacatgcccgagcatccggtgatgcaggcgctggccgccggggaccgcgacggc
ttctatcagctggaggcggagatgcggctggaggccgggatgccgcccttcggacggctg
gccgccctgatcgtgtcgggggaggatgcggcggcggtggaaaagctgtccatcgcgctg
ggccgcgccgcgccgcgcagcgacaccgtcgccgtgctgggtccggccccggcgccgctc
gccctgctgcgcgggcgccatcggcggcgtctgctgctgaaggcgccgcgcaccgtccag
gtgcaacccctgatcgcgcaatggctggagcaggtggaaattccacccaacgtgcgcgtg
caggtggacgtggatccctacagcttcctgtag
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