Azospirillum sp. TSH58: TSH58p_14195
Help
Entry
TSH58p_14195 CDS
T05449
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt03420
Nucleotide excision repair
azt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TSH58p_14195
03430 Mismatch repair
TSH58p_14195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_14195
Enzymes [BR:
azt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TSH58p_14195
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TSH58p_14195
MMR (mismatch excision repair)
Other MMR factors
TSH58p_14195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DEAD
AAA_12
Metallophos_C
AAA_22
sCache_2
Motif
Other DBs
NCBI-ProteinID:
AWJ84577
LinkDB
All DBs
Position
2280720..2283059
Genome browser
AA seq
779 aa
AA seq
DB search
MSDPYAYDDPLGHDPLSHAGAPAPAPVQRFAYLDGLNPVQREAVEALDGPVLVLAGAGTG
KTRVLTTRLAHLLMTRRAAAFQILAVTFTNKAAREMRERVAHLVGIEPEGWWLGTFHALA
ARILRRHAELVGLKSNFTILDTDDQIRLIKQLLEAANVDSKKWPARQVLGVIERWKDRGL
TPDRLNEGDGGDVAGGRVVALYRAYQERLRTLNACDFGDLLLHNITLFQKHPDVLAEYHR
KFKYILVDEYQDTNVAQYLWLRILSQAHKNICCVGDEDQSIYAWRGAEIGNILRFEADFP
GAKVVKLEQNYRSTGHILSAASGLIANNKGRLGKTLWTQADGGEPVRVRGVWDGEEEARW
VGDEIEALQRQGVSLAQIAVLVRAGFQTREFEERFITLGLPYRVIGGPRFYERQEIRDAM
AYLRVVNSPDDDLAFERIVNVPKRGVGPAALQCLYQAARSRGMPLTEAGWALTETDELKP
KVRGVMRNLLQDFFRWRTLSATMPHTELARMVLDESGYTRMWQEDKTPEAPGRLENLKEL
ITAMAEFENLSGFLEHVALVMENAEAAGVDQVTVMTLHGAKGLEFDMVFLPGWEEGVFPN
QRALDETGIAGLEEERRLAYVGLTRARKRAYISHAANRRLYGNWVSAIPSRFVDEIPGGD
VEAEAASGLYPGGNAGGGFGGGGSFRDSSSYAAFRAGQQAAGRQQPPSPRTITLDSGSYQ
VAPRARPNAPFPKGARVFHQKFGYGTVTAVDQDKLEIDFDQAGSKKVMDSFVVPAEKAG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccctacgcctacgacgacccgctgggccatgatcccctcagccacgcgggc
gccccggcccccgcgccggtccagcgcttcgcctatctggacgggctgaaccccgtgcag
cgcgaggcggtggaggctctggacggtccggttctggtgctggccggcgccggcacgggc
aagacgcgggtgctgacgacgcggctggcccatctgctgatgacgcgccgagccgccgcc
ttccagatcctggcggtgaccttcaccaacaaggccgcccgcgagatgcgggagcgcgtc
gcccatctggtggggatcgagccggagggctggtggctgggcaccttccacgcgctggcc
gcgcgcatcctgcgccgccacgcggagctggtggggctgaagtccaacttcaccatcctc
gacaccgacgaccagatccgcctgatcaagcagcttctggaggcggcgaacgtcgattcc
aagaagtggccggcgcggcaggtgctgggcgtgatcgagcgctggaaggaccgcggcctg
acgccggaccggctgaacgagggcgacggcggcgacgtggccggcgggcgcgtggtggcg
ctctaccgcgcctaccaggagcggctgcgcacgctgaacgcctgcgacttcggcgacctt
ctgctgcacaacatcacgctgttccagaagcacccggacgtgctggcggaataccaccgc
aagttcaagtacatcctggtggacgagtatcaggacaccaacgtcgcccagtatctctgg
ctgcgcatcctctcgcaggcccacaagaacatctgctgcgtcggcgacgaggaccagtcg
atctacgcctggcgcggcgccgagatcggcaacatcctgcgcttcgaggccgacttcccc
ggcgccaaggtggtcaagctggagcagaactaccgctccaccgggcacatcctgtccgcg
gcctccggcctgatcgccaacaacaaggggcggctcggcaagacgctgtggacccaggcg
gacggcggcgagccggtgcgcgtgcgcggcgtctgggacggcgaggaggaggcccgctgg
gtcggcgacgagatcgaggcgctgcagcgccagggcgtctcgctggcccagatcgccgtg
ctggtccgcgccggcttccagacccgcgagttcgaggagcgcttcatcacgctgggcctg
ccctaccgggtgatcggcggcccgcgcttctacgagcggcaggagatccgcgacgcgatg
gcctatctgcgcgtcgtcaactcgcccgacgacgatctggccttcgagcgcatcgtcaac
gtgcccaagcgcggcgtcggcccggcggccctgcaatgcctctatcaggcggcgcgctcg
cgcgggatgccgctgaccgaggccggctgggcgctgaccgagacggacgagctgaagccc
aaggtgcgcggcgtgatgcgcaacctgcttcaggacttcttccgctggcgcaccctgtcg
gcgaccatgccgcacaccgaactggcccgcatggtgctggacgagtccggctacacccgc
atgtggcaggaggacaagacgcccgaggcgccgggccggctggagaacctcaaggaactc
atcaccgccatggcggagttcgagaacctgtcgggcttcctggagcatgtcgccctggtc
atggagaacgccgaggccgccggcgtcgatcaggtcaccgtgatgaccctgcacggcgcc
aaggggctggagttcgacatggtcttcctgcccggctgggaggagggcgtgttccccaac
cagcgcgcgctggacgagaccggcatcgccgggctggaggaggagcgccgcctcgcctat
gtcgggctgacccgggcgcgcaagcgggcctacatcagccacgccgccaaccggcggctc
tacggcaactgggtcagcgccatcccctcccgcttcgtcgacgagatccccggcggcgac
gtcgaggcggaggcggcgagcggcctctaccccggtggcaacgccggtggcggcttcggc
gggggagggagcttccgcgactcgtcgagctacgccgccttccgcgccggccagcaggcg
gcgggccggcagcagcccccgtcgccgcgcaccatcacgctggacagcggctcctatcag
gtcgccccccgcgcccgcccgaacgcgcccttcccgaagggggcgcgggtcttccaccag
aagttcggctacggcaccgtcacggcggtcgatcaggacaagctggagatcgacttcgat
caggccggcagcaagaaggtgatggacagcttcgtggtgccggcggagaaggcgggctga
DBGET
integrated database retrieval system
