Azospirillum sp. TSH58: TSH58p_20460
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Entry
TSH58p_20460 CDS
T05449
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt03030
DNA replication
azt03410
Base excision repair
azt03420
Nucleotide excision repair
azt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TSH58p_20460
03410 Base excision repair
TSH58p_20460
03420 Nucleotide excision repair
TSH58p_20460
03440 Homologous recombination
TSH58p_20460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azt03032
]
TSH58p_20460
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_20460
Enzymes [BR:
azt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TSH58p_20460
DNA replication proteins [BR:
azt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TSH58p_20460
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TSH58p_20460
NER (nucleotide excision repair)
GGR (global genome repair) factors
TSH58p_20460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
NYN_YacP
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
AWJ85915
UniProt:
A0A2S1XN57
LinkDB
All DBs
Position
TSH58_p04:complement(438956..441868)
Genome browser
AA seq
970 aa
AA seq
DB search
MSDEKTTDTLQTVTDAPASAGDGSGLYLVDGSGFIFRAFHALPMLNRPDGTPVNAVLGFS
NMLLKLLADLKASAVAVVFDSKRLNFRNEFYPEYKAHRPEPPEELKPQFALIREATEAFC
LPCLELEGYEADDLIATYARLANEAGREVTIVSSDKDMMQLVRPGVRMLDPLKNKPIGPD
EVFEKFGVAPDKVVDVQALAGDSVDNVPGVPGIGVKTAAQLITEYGDLESLLARAGEIKQ
PARRQKLIDFAEQARISRRLVLLDDHAPPPKPLEELRVREPDHQKLIDFLRAQGFRTIVS
RVEAEMRKDGTIADGAVPSAAPSSAPAKPAASAGSTAPAAEAGAPRSRPAPPTDVEQRYE
LVQDLDALAVWLERARTTGILAVDTETDSLTPATATLVGISLATEPGLACYIPLAHQAPN
AAASGELSFETPEAPKQIPAEDALKALRDVLEDPAILKIGHNFKFDHQLFARHGVRVSPV
DDSMLISYVLEGGAHGHGMDELAELHLAHTTIPYKEVCGTGKNQITFDRVPLDKALAYAA
EDADITLRLWRVLKPRLVDERMVTVYETLERPLVPVIADMESCGIRVDRAALARLSQDLA
VRMAEIEKEVHQHAGRSFNIGSPKQLGEILFDEMKLGTGKKGKTGAYSTDSSVLEELSEQ
GHVIAQRVLDWRQLAKLKNTYTDALQAQIVEGTERVHTAFAMAATNTGRLSSTDPNLQNI
PVRTEEGRKIRRAFVAAPGHRLISIDYSQIELRLVAEMADIAALKQAFQDGIDIHAATAS
QVFGVPLDQMTSEIRRKAKAINFGIIYGISGFGLGRQLGIAPGEANTFIKAYFERFHELK
VWMEATKAFARQNGHVVTLFGRRCYIPGIHDKNAARRAFAERQAINAPIQGTAADIMKRA
MARVPGALKEAGFDDVRMLLQVHDELLFEAPEDQAERAAALVRSVMEGAAALGVPLVAEA
GIGGNWDEAH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaaaagaccaccgacacgctccagaccgtcaccgacgcccccgcttccgcc
ggggacggcagcggcctgtatctggtggacgggtcgggcttcatcttccgggccttccac
gccctgccgatgctgaaccgcccggacggcacgccggtgaacgcggtgctgggcttctcc
aacatgctgctgaagctgctggccgacctgaaggcgtccgcggtggcggtggtcttcgat
tcgaagcggctgaacttccgcaacgagttctatcccgaatacaaggcccaccgccccgag
ccgccggaggagctgaagccccagttcgccctgatccgcgaggcgacggaggccttctgc
ctgccctgcctggagctggagggctacgaggccgacgacctgatcgccacctacgcgcgg
ctggccaacgaggccgggcgcgaggtcaccatcgtgtcgtccgacaaggacatgatgcag
ctcgtccgccccggcgtgcggatgctcgacccgctgaagaacaagcccatcggccccgac
gaggtgttcgagaagttcggcgtcgccccggacaaggtggtggacgtgcaggcgctggcc
ggcgacagcgtggacaacgtgccgggcgtgccgggcatcggcgtgaagaccgccgcccag
ctcatcaccgaatacggcgacctggaatcgctgctggcccgcgccggcgagatcaagcag
ccggcccgccgccagaagctgatcgacttcgccgagcaggcacggatttcccgccgcctc
gtcctgctggacgaccacgccccgccgccaaagccgctggaggagctgcgcgtccgcgag
cccgaccaccagaagctgatcgacttcctgcgcgcccagggcttccgcaccatcgtcagc
cgcgtcgaggcggagatgcgcaaggacggcaccatcgccgacggcgcggttccctccgcc
gcgccgtcctcggctccggccaagccagccgcttccgccggcagcaccgccccggcggcg
gaggccggcgcgccgcgcagccgccccgccccgcccaccgacgtcgagcagcgctacgaa
ctggtgcaggatctcgacgcgctggccgtctggctggagcgcgcccggaccaccggcatc
ctggccgtggacaccgagaccgactcgctgacccccgccacggcgacgctggtcggcatc
tcgctggcgacggagccggggctggcctgctacatccccctggcgcatcaggcccccaac
gcggcggccagcggggagctgtccttcgagactccggaagcgccgaagcagataccggcg
gaggacgctctgaaggcgctgcgggacgtgctggaggacccggcgatcctgaagatcggg
cacaatttcaagttcgaccaccagctcttcgcccgccacggcgtgcgcgtgtcgccggtc
gacgacagcatgctgatctcctacgtgctggagggcggcgcccacggccacggcatggac
gagctggcggagctgcatctcgcccacacgaccatcccctacaaggaggtctgcggcacc
gggaagaaccagatcaccttcgaccgcgtgccgctggacaaggcgctggcctacgcggcg
gaggacgccgacatcaccctgcggctgtggcgggtgctgaagccgcggctggtcgacgag
cggatggtcaccgtctacgagacgctggaacgcccgctggtcccggtgatcgccgacatg
gaatcctgcggcatccgggtggaccgggcggcactcgcccgcctgtcccaggacctcgcc
gtacgcatggccgagatcgagaaggaggtgcaccagcacgccgggcgcagcttcaacatc
ggctcgcccaagcagctcggcgaaatcctgttcgacgagatgaagctcggcaccggcaag
aagggcaagaccggcgcctactccaccgattccagcgtgctggaggagctgtcggagcag
ggccacgtcatcgcccagcgcgtgctcgactggcggcagctggccaagctgaagaacacc
tacaccgacgcgctccaggcgcagatcgtcgaggggacggaacgcgtccacaccgccttc
gccatggcggcgaccaacaccggccgcctgtcctcgaccgacccgaacctgcagaacatc
cccgtccgcaccgaggagggccgcaagatccgccgcgccttcgtggcggcgccggggcac
cggctgatctccatcgactattcgcagatcgagctgcggctggtcgccgagatggccgac
atcgccgcgctgaaacaggccttccaggacggcatcgacattcacgcggccaccgccagc
caggtcttcggcgtgccgctggaccagatgacctcggaaatccggcgcaaggccaaggcg
atcaacttcggcatcatctacggcatctccggcttcgggctgggccgccagctcggcatc
gcgccgggcgaggccaacaccttcatcaaggcctatttcgagcgcttccacgagctgaag
gtgtggatggaggcgaccaaggccttcgcccgccagaacggccatgtggtgacgctgttc
ggacggcgctgctacatccccggcatccacgacaagaacgccgcccgccgcgccttcgcg
gaacggcaggcgatcaacgccccgatccagggcaccgccgccgacatcatgaagcgtgcc
atggcccgcgtgcccggcgccctgaaggaggccgggttcgacgacgtgcggatgctgctc
caggtgcacgacgaactgctgttcgaggctccggaggatcaggccgaacgagccgccgcc
ctggtgcgctcggtcatggaaggcgccgccgcgctcggcgtgccgctggtggcggaggcc
ggcatcggcggcaattgggacgaggcgcattga
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