Azospirillum sp. TSH58: TSH58p_25040
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Entry
TSH58p_25040 CDS
T05449
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TSH58p_25040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_25040
Enzymes [BR:
azt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TSH58p_25040
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TSH58p_25040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWJ86727
UniProt:
A0A2S1XQG8
LinkDB
All DBs
Position
TSH58_p02:788547..789407
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AA seq
286 aa
AA seq
DB search
MIDQSDILAALRWHVDIGCDEAIGDEPLDWATLAARPAVARAPAGASALPPAAARPAPAS
RSAFGGPSGASMFGAPVTADLPLGASEAGASARARAAEARSLEELEAALRAFDGCPLKAT
AMNTVFADGNPAADIMLIGEAPGEDEDRQGKPFVGVSGKLLDRMLAQVGLDRGTVYISNI
LPWRPPGNRSPTQAEIAACLPFLERHVELIGPKVLVPLGGTSAKTLLNRAEGITRLRGRW
FDYASPGLPGPVPVLPMLHPAYLLRNPIAKREAWRDLLTLRQRFPG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccaatccgacatcctcgccgccctgcgctggcacgtcgacatcgggtgcgac
gaagcgatcggggacgagcccttggactgggcgacgctggccgcccggccggcggtggcg
cgtgcgccggccggcgcgtcggcgctgccgcccgccgcggcgcgccccgccccggcgtcg
cggtcggcgttcggtggtccctccggcgcgtcgatgttcggtgcgccggtcacggcggac
ctgccgctgggcgccagcgaggccggggcgagcgcccgcgcccgcgccgccgaagcgcgc
agcctggaggagcttgaggccgcgctgcgcgccttcgacggttgcccgctgaaggcgacg
gcgatgaacacggtcttcgccgacggcaaccccgccgcggacatcatgctgatcggcgag
gcgccgggcgaggacgaggaccggcagggcaagcccttcgtcggggtcagcggcaagctg
ctcgaccgcatgctggcccaggtgggactcgaccgcggcacggtctacatcagcaacatc
ctgccctggcgcccgcccggcaaccggtcgcccacccaggcggaaatcgccgcctgcctg
cccttcctggagcggcacgtcgagctgatcggaccgaaggtgctggtgccgctgggcggc
acctcggccaagacgctgctcaaccgggccgagggcatcacccgcctgcgcggccgctgg
ttcgactacgcttcccccggcctgcccggcccggtgccggtcctcccgatgctccacccg
gcctatctgctgcgcaacccaatcgccaagcgcgaggcgtggcgcgacctgctgaccctg
cgccagcgctttccgggctga
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integrated database retrieval system
