Azospirillum sp. TSH58: TSH58p_25855
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Entry
TSH58p_25855 CDS
T05449
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
azt
Azospirillum sp. TSH58
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azt03016
]
TSH58p_25855
Enzymes [BR:
azt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TSH58p_25855
Transfer RNA biogenesis [BR:
azt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TSH58p_25855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AWJ86860
UniProt:
A0A2S1XQZ0
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All DBs
Position
TSH58_p02:1000739..1001365
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AA seq
208 aa
AA seq
DB search
MPIDLHDGDLPDGLDLKSLARGGAVAIDTETMGLNPHRDRLCLVQLSPGDGTVHLVQFRK
GQYEAPNLKRLLADPEVTKLFHFARFDVAVMRAYLGVACQPVYCTKVASKLVRTFTDKHG
LKDLVKDLLGVELSKQQQSSDWGAAELTPEQMKYAASDVLHLHDLKEKLDVMLAREGRTH
LAKACFDFLPARGELDLGGWEQPDILSH
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcgacctccatgacggcgacctgccggacggtctcgatctgaagtccctcgcc
cgcggcggcgccgtcgccatcgacaccgagaccatggggctgaacccccaccgcgaccgg
ctgtgcctggtccagctttcccccggtgacggcacggtccatctggtccagttccgcaag
ggccagtacgaggcgccgaacctgaagcgcctgctcgccgaccccgaggtcaccaagctg
ttccatttcgcccgcttcgacgtggcggtgatgcgggcctatctcggcgtcgcctgccag
ccggtctactgtaccaaggtcgcgtccaagctggtccgcaccttcaccgacaagcacggg
ctgaaggatctcgtgaaggacctgctgggggtggagctgtccaagcagcagcagtcctcc
gactggggggccgcggagctgacgccggagcagatgaaatacgccgcctccgacgtgctg
cacctgcacgacctcaaggagaagctggacgtcatgctggcgcgcgaggggcggacccat
ctcgccaaggcctgcttcgacttcctgcccgcccgcggggaactggacctcggcggctgg
gagcagccggacattctgtcgcattga
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