Azospirillum sp. TSH58: TSH58p_28415
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Entry
TSH58p_28415 CDS
T05449
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
azt
Azospirillum sp. TSH58
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azt03016
]
TSH58p_28415 (rnd)
Enzymes [BR:
azt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TSH58p_28415 (rnd)
Transfer RNA biogenesis [BR:
azt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TSH58p_28415 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWJ87713
UniProt:
A0A2S1XTC3
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All DBs
Position
TSH58_p02:complement(1576987..1578153)
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AA seq
388 aa
AA seq
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MTLITTTEDLDAFCRSLAGVDYITVDTEFLREKTYWPQLCLVQVGGPNGAVAIDPLAEGI
DLAPLFRVMVDPAILKVFHAARQDVEIFWHLSGQIPHPLFDTQVAAMVCGFGESVGYETL
VTKLAGARIDKSSRFTDWSHRPLTERQLTYALSDVIHLRPAYEKLKRRLVRSGRAHWLEE
EMAVLTDPATYQVDPDSSWLRLKVRTNKPRFMAVLKELAAWREREAQRRDLPRSRVLRDE
ALLEIAAHAPTSVDDLARTRGMGRGFAEGRQGADVLACVQKGLDLPESELPRVEPREEPP
PGLQPIVELLRVLLKMKCEENNVASKLIASAADLEAIAADDEAQVPAMQGWRRELFGEDA
LALKHGRIGLAVLDRRVRIVPTANGEGP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacactgatcacgaccaccgaagaccttgacgccttctgccgctcgctggccggggtg
gactacatcaccgtcgacaccgaattcctgcgcgagaagacctattggccgcagctctgc
ctcgtgcaggtgggcgggccgaacggcgcggtcgccatcgacccgctggccgagggcatc
gatctggcgccgctgttccgcgtgatggtggacccggccatcctcaaggtgttccacgcc
gcccggcaggacgtggagatcttctggcacctgtccggccagatcccccacccgctgttc
gacacccaggtcgccgccatggtctgcggcttcggcgagagcgtggggtacgagacgctg
gtcaccaagctggccggcgcgcgcatcgacaagtccagccgcttcaccgactggtcgcac
cgcccgctgaccgagcggcagctgacctacgccctgtccgacgtcatccacctccgccca
gcctacgagaagctgaagcgccgcctcgtccgctccggccgcgcccactggctggaagag
gagatggccgtcctgaccgatccggccacctatcaggtggacccggacagctcctggctg
cgactgaaggtgcgcaccaacaagccgcgcttcatggccgtcctcaaggagctggcggcg
tggcgggagcgcgaggcgcagcgccgcgacctgccccgctcccgcgtgctgcgggacgag
gcgctgctggagatcgccgcccacgccccgaccagcgtggacgacctcgcccgcacccgc
ggcatgggccgcggcttcgccgagggacggcagggcgccgatgtgctggcctgcgtccag
aagggtctggacctgccggagtccgaactgccccgcgtcgagccgcgcgaggagccgccg
cccggactgcaacccatcgttgaacttctccgcgttcttctgaaaatgaagtgcgaagag
aacaacgtggcgtccaaactgatcgcgtcggccgccgatctggaagcgatcgcagcggac
gacgaggcccaggtgcccgcgatgcagggctggcgccgggaattgttcggcgaagacgcg
ctggcgctgaagcatggccgcatcggtctggcggtgctcgaccgccgtgtccgcatcgtt
ccgaccgccaatggagaggggccgtaa
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