Azospirillum sp. TSH58: TSH58p_29670
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Entry
TSH58p_29670 CDS
T05449
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
azt
Azospirillum sp. TSH58
Pathway
azt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
azt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TSH58p_29670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azt03021
]
TSH58p_29670
03400 DNA repair and recombination proteins [BR:
azt03400
]
TSH58p_29670
Enzymes [BR:
azt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TSH58p_29670
Transcription machinery [BR:
azt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TSH58p_29670
DNA repair and recombination proteins [BR:
azt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TSH58p_29670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AWJ87538
UniProt:
A0A2S1XTI3
LinkDB
All DBs
Position
TSH58_p02:1839944..1840390
Genome browser
AA seq
148 aa
AA seq
DB search
MARVTVEDCVLKVPNRFELVMMAAQRAREIASGAPLSIDRDNDKNPVVALREIADETVML
EHLKNALIKGHQKHVEPDEPEEEIVELMAGEHDWAARGDTSLEDEDGMSEAEEVGEGDDL
LSDMESDPAAAFGMTEDDVAGRDADGDL
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttaccgtcgaagattgcgtcctcaaggttccgaaccggtttgagctggtc
atgatggcggcccagcgcgcgcgtgagatcgcgtccggcgccccgctgtcgatcgaccgc
gacaacgataagaacccggtcgttgccctgcgtgagatcgccgatgagacggtgatgctg
gagcatctgaagaacgccctgatcaagggccaccagaagcacgtcgagcccgacgagccc
gaggaggagatcgtcgagctgatggccggcgagcacgactgggccgcccgcggcgacacg
tcgctggaggacgaggacgggatgagcgaggcggaggaggtcggcgaaggcgacgacctg
ctgtccgacatggagagcgatccggcggcggccttcggcatgaccgaggacgatgtcgcc
ggccgcgatgcggacggagatctctga
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