Acinetobacter zhairhuonensis: ACJQW4_03895
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Entry
ACJQW4_03895 CDS
T11554
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
azu Acinetobacter zhairhuonensis
Pathway
azu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
azu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACJQW4_03895 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
azu03021
]
ACJQW4_03895 (rpoB)
03400 DNA repair and recombination proteins [BR:
azu03400
]
ACJQW4_03895 (rpoB)
Enzymes [BR:
azu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACJQW4_03895 (rpoB)
Transcription machinery [BR:
azu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACJQW4_03895 (rpoB)
DNA repair and recombination proteins [BR:
azu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACJQW4_03895 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
XNP50385
LinkDB
All DBs
Position
complement(836100..840188)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPSVMDAPYLLSIQVDSYRTFLQDGKSPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALDYSNEQILDLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDIADNDGKVIVEQGKRINARHVRQMEAAGLTKLPVPDEYLYERIT
AENITLRDGEVIAANTLLSHEIMVKLAEGGVKQFNILFTNDIDRGSFIADTLRADTTTGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSNSDITDVLKTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKCNNFGFLETPY
RKVVDGHVTNEVEYLSAIEEVGTVIAQADSAVDADNHLTEEFVSVRHQGDFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLLADKPLVGTGMEANVARD
SGVCVIANRGGAIEYVDASRIVIRVNEEEMVAGEAGVDIYNLIKYTRSNQNTCINQNVVV
RMGDKVARGDVLADGPSTDGGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVAAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDERALAIEKA
QLDAYRKDLKEEYKIFEEAARERVVRLLTGQESNGGGGTKRGDKLSEDMLSGLELVDLLE
IQPSDEAIAERLTQIQVFLKEKSFEIDEKFAEKKRKLSTGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGEQIDKMLKQQREIAELRIFLDKIYNKVGGQQEDLDSLTDDEILVLAGNLRAGVP
LATPVFDGAEESQIKELLELAEIPRSGQTVLFDGRTGERFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgcctagt
gttatggatgctccgtacttgctttcgattcaagtcgactcgtacagaacgttcctgcaa
gatggcaaatcaccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctattgaaagttattctggcaatgctgctctagaatttgttgagtatagccttggt
aagcctgagtttgacgttcgcgaatgtatccttcgtgggtcgacttatgctgcaccaatg
cgcgtaaaaattcgtttgatcatcaaagatcgtgaaacgaaatcaatcaaagatgtgcgt
gagcaagaagtgtacatgggtgaaatgccactcatgaccgataacggtactttcgttatt
aatggtactgagcgtgtaatcgtttctcagttacaccgttctccaggcgtgttctttgac
catgacaagggtaaaactcactcaagcggtaaagtgctttattcagcacgtattatccct
taccgtggttcatggttagactttgaatttgatgcgaaagacttagtctatgtacgtatt
gaccgtcgtcgtaaattacttgcgacagtggtgcttcgtgcattggattacagcaacgaa
caaattctagacttgttctacgagaaagtacctgtctacttagacatgggtagctaccaa
attgaccttgttccagaacgtctgcgtggcgaaatggcgcaattcgacattgctgataat
gacggcaaagtgattgttgagcaaggtaagcgtattaatgcgcgtcatgtacgtcaaatg
gaagctgctggcttaaccaagctcccagttccagatgaatacttgtacgagcgtatcact
gctgaaaacatcacactacgtgatggcgaagtcattgctgcgaacaccctattaagccat
gaaattatggtgaaattggctgaaggtggcgtgaaacagtttaacattctgttcaccaac
gacatcgaccgtggttcatttatcgcggatactttacgtgcagatacgacaacaggacgc
gaagaagcgcttgttgaaatctacaaagtaatgcgtccaggcgagccaccaactaaagaa
gcggctgaaaacttattcaataacttgttcttctcttctgagcgttatgatttatcgcca
gtgggtcgtatgaagttcaaccgtcgcttaggtcgtccttatgaagtaggtacagaccag
aagtcgcgtgaagttgaaggtattctttcgaatagcgatatcactgatgtattaaaaaca
ttggttgaaattcgtaacggcaaaggcgaagtggacgatatcgaccacttgggtaaccgt
cgtgttcgttctgttggtgaaatgactgaaaaccaatttcgtgttggtttagttcgtgtt
gaacgtgcagttaaagagcgtttaagccaagcagaaactgataacttgtctccacaagac
ttgatcaatgcgaaacctgtagcagctgcaatcaaagaattctttggttctagccagtta
tctcagttcatggatcaaaacaatccattgtctgaaattacacataagcgtcgtgtatca
gcgcttggacctggtggtttaacacgtgaacgtgcgggctttgaggtacgtgacgtacat
caaactcactacggtcgtgtatgtcctattgaaacgcctgaaggtccaaacattggtttg
atcaactcgctttctgtttatgcaaaatgtaataacttcggtttcttggaaactccatac
cgtaaagttgttgatggtcatgtaacaaatgaagttgaatacttatctgcgattgaagaa
gtaggcactgttattgcacaggccgactctgctgttgatgccgataatcatttgacggaa
gaatttgtttctgtacgtcaccaaggtgatttcgtacgtatgccgcctgaaaaagtgacg
catatggacgtttctgctcagcaggtagtatctgttgctgcatcgctaattccattcctt
gaacacgatgatgcgaaccgtgcattaatgggttcgaacatgcaacgtcaggctgttccg
acattactggctgacaagccacttgttggtacaggtatggaagcaaacgtagcacgtgac
tcgggtgtgtgtgtcatcgcaaaccgtggcggtgcaattgaatacgttgatgcttctcgt
atcgtgattcgtgttaacgaagaagaaatggtggctggtgaagcaggtgtggacatctac
aacctgatcaaatacacccgttctaaccaaaatacatgtatcaaccaaaacgttgttgtt
cgtatgggcgacaaagttgcgcgtggtgacgtattggctgatggaccatcgactgatggt
ggtgagcttgcgcttggtcaaaacatgcgcgttgcgtttatgacatggaacggttacaac
tacgaagactcgatcttattatctgagcgtgtacttcaagaagaccgtttgacttcgatt
cacatccaagaattgtcatgtgttgcacgtgatactaagttgggtgcagaagaaattaca
gccgatatcccgaacgtgggtgaagctgcgctttctaaactggatgaatcaggtattgtt
tatatcggtgctgaagttgctgctggcgacatccttgttggtaaagtaacgcctaaaggt
gaaacgcaattaacaccagaagaaaaactgcttcgtgcaatcttcggtgaaaaagcggct
gacgtaaaagactcgtctttacgtgttccatcgggtacgaaaggtacagttatcgacgtt
caagtcttcactcgtgatggcttggagaaagatgaacgtgcacttgcaattgaaaaagct
caattagacgcttaccgtaaagacttgaaagaagaatacaaaatcttcgaagaagctgct
cgtgaacgtgttgttcgcttgttgactggtcaagaatcaaatggcggtggtggcactaag
cgtggcgacaaactttctgaagatatgttgtctggcttagagttagttgacttacttgaa
atccaaccaagcgatgaagcaattgctgaacgtttaacgcaaattcaagtgttcttgaaa
gagaaaagcttcgaaattgacgagaagtttgctgagaaaaaacgcaaactttctacaggt
gatgaactgacaactggcgtattgaaagttgtgaaggtctatcttgcagttaaacgtcgt
atccagcctggtgataagatggcgggtcgtcacggtaacaagggtgttgtatcaaacatc
ttaccagttgaagacatgccgcatgatgccaatggtgtaccagttgacatcgtattgaac
ccgttgggtgtaccgtcacgtatgaacgtgggtcagatccttgaaactcacttgggtatg
gcagcgaaaggcttgggtgagcaaattgataagatgctcaaacaacaacgtgaaattgct
gagttacgtatcttccttgacaagatctacaataaagtaggcggtcagcaagaagatcta
gacagcttgactgatgatgaaatcttggtattggcgggtaacttacgcgctggtgtacct
ttagcaacaccagtatttgatggtgctgaagaaagccaaatcaaagagttacttgaactt
gctgaaattccacgttctggtcaaacggtattgtttgatggacgtacaggtgaacgtttc
gaccgtcctgtaactgtaggttatatgtacatgctcaagttgaaccacttggttgatgac
aagatgcatgcacgttctactggctcttactcattagtaacgcaacagccattgggtggt
aaagctcagttcggtggtcagcgtttcggtgagatggaggtctgggcacttgaagcttac
ggtgcagcttatacacttcaagaaatgctcactgtgaagtcggatgacgttgaaggtcgt
acccgtatctataagaacattgtagatggtaaccattacatggacccaggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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