Arthrobacter zhaoxinii: N2K95_10790
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Entry
N2K95_10790 CDS
T09564
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
azx
Arthrobacter zhaoxinii
Brite
KEGG Orthology (KO) [BR:
azx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
azx03016
]
N2K95_10790
Enzymes [BR:
azx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
N2K95_10790
Transfer RNA biogenesis [BR:
azx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
N2K95_10790
Prokaryotic type
tRNA splicing ligases
N2K95_10790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
LppC
Motif
Other DBs
NCBI-ProteinID:
UWX96158
UniProt:
A0ABY5YNA2
LinkDB
All DBs
Position
complement(2302709..2303902)
Genome browser
AA seq
397 aa
AA seq
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MNLERVAVEQKVNEKYINFASVIDEVTLEQNTKTSRMPFIYPHLASMPDAHLGKGAAVGS
VIPTLGAIIPAAVGVDIGCGMIAVRTQHSAADIAGKNRRVLREAIEHAIPLSAGNNNRSL
TDSARLRVEELADDAAAAGFDPAAYLKGWRLQLGTLGSGNHFIEVSLDEEDAVWLFLHSG
SRGVGNKIAQQHIWAAQNYCGKRSIDLPDRDLAYLEEGTAEFDRYIAELMWAQKFALLNR
EEMMDRVVACFSAWTGEPVQERERINCHHNYTEVEHHYGRDVWLSRKGAIDASPGRPGLI
PGSMGTASYVVEGKGYAPSLNSAPHGAGREYSRTRARKTFSQEQLRKAMKGIEFRDTPAF
IDEIPAAYKDIDAVMADAKDLVTVKHVLRQLVNVKGN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
gtgaacttagaaagggtggccgtggagcagaaggtcaacgaaaagtacattaatttcgcc
agtgtgattgacgaagtaactctggaacagaacaccaagacctcccggatgcccttcatt
tatccgcacctcgcttcgatgccggatgcccatctggggaagggtgcggcggtgggctcc
gtcattcccactctgggagcgattatccccgcggcggtcggcgtcgatattggctgcggc
atgattgccgtccgcacccagcattccgccgcggatattgccgggaaaaaccgccgggtg
ctccgcgaagcgattgaacacgccattccgctttcggccggcaacaacaaccgcagcctc
accgactcggcccgcctccgcgtcgaggagctggccgacgacgccgctgccgccggcttt
gatcccgcggcctacctgaagggctggcggctccagctgggcacgctgggctcgggcaac
catttcatcgaagtgtccctggacgaggaggacgccgtctggctgttcctgcattcaggc
tcacgcggcgtcggaaacaagatcgcccagcagcacatctgggccgcgcagaactactgc
gggaagcggtccatcgacctgcccgaccgggacctggcctatctggaggaagggaccgcg
gagtttgaccggtacattgccgaactcatgtgggcgcagaagttcgcgctgctgaaccgc
gaggagatgatggaccgggtggtggcctgcttcagcgcgtggacgggggagcccgtgcag
gagcgggagcggatcaactgccaccacaactacaccgaggtggagcaccactacggcagg
gacgtctggctttcccgcaagggcgccatcgacgcctcgccgggacggcccggactgatt
ccgggatccatgggcacggcttcgtacgtggtggaaggcaaggggtacgcgccgtcgctg
aactccgcaccgcacggggccggtcgggagtattccaggaccagggctcgcaagaccttc
agccaggagcagctgcggaaggcaatgaaggggattgagttccgcgacaccccggccttc
attgacgagatcccggcggcgtacaaggacatcgacgccgtcatggcggatgcgaaggat
ctggtcacggtgaagcacgtgctgcggcagcttgtgaatgtgaaggggaactag
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