Arthrobacter zhaoxinii: N2K95_12970
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Entry
N2K95_12970 CDS
T09564
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
azx
Arthrobacter zhaoxinii
Pathway
azx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
azx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N2K95_12970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
azx03019
]
N2K95_12970
03009 Ribosome biogenesis [BR:
azx03009
]
N2K95_12970
Enzymes [BR:
azx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N2K95_12970
Messenger RNA biogenesis [BR:
azx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N2K95_12970
Ribosome biogenesis [BR:
azx03009
]
Prokaryotic type
rRNA helicases
N2K95_12970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
Cas3-like_C_2
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
UWX98751
LinkDB
All DBs
Position
complement(2782565..2784397)
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AA seq
610 aa
AA seq
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MLFSDFGLDERVLAALKDVGYVTPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPAL
SLLAGRPATKDTQVLVLAPTRELALQSAEAFTSYAVHMDGITVLPVYGGSAYGPQLNGLR
RGAQVVVGTPGRVIDHIAKGSLNLSNLEYLVLDEADEMLRMGFAEDVEQILSSTPASKQV
ALFSATMPPAIRKIAKKYLNNAAEITVKSKTTTGANTRQRYVQVMGPHKLDAMTRILETE
EFDGVIAFVRTKAATEDLADKLKDRGYNAAAINGDIPQQQRERTVEALRDGKIDILVATD
VAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRTGDAILFMTPREKYLLRAIEKA
TRQPVEHMQLPSVDVVNEKRLAKFSEKITETLGSEDIAVFRDLVTKYLAEHEVPAEDVAA
ALAVMAQGGRDLLLREIPVAPARQRERSEGRNDGVGSRGPTRPLTEGNATYRIAVGRRQR
VLPGSIVGAIANEGGLSSAQIGGIDIRADHTLVELPADLSKDQLRALSRTRIGGELIHLE
LDKGRKPAREREGGGSFNDRADRGGFKKDFKKRDGERSFGDRGSDRPFKKREGGFRDAAA
TGARKPRFRD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgctgttcagtgacttcggattggacgagcgcgtcctggcagccctgaaggatgtcggc
tacgtaacgccgtctcccatccaggcagctaccatccccctgctgctcgaaggccgcgac
gtcgtcggcctggcccagacgggtaccggcaagaccgcggcattcgcggttcccgccctg
tccctgctcgccggccgcccggcaaccaaggacacccaggtcctggtgcttgcaccgacc
cgtgaactggccctgcagtctgcagaagccttcacctcctacgcagtccacatggatggc
atcaccgtgcttcccgtgtacggcggttccgcctacggcccccagctcaacggcctccgc
cgcggcgcccaggttgttgttggcacccccggccgtgtgattgaccacatcgccaagggt
tccctgaacctgtccaacctcgagtacctggtgctcgatgaggctgacgaaatgctgcgc
atgggcttcgccgaagacgtggagcagattctttcctccactccggcgagcaagcaggtt
gccctgttctccgccaccatgccgccggccatccgcaagattgccaagaagtacctgaac
aacgctgcggaaatcacggtcaagtccaagaccaccaccggtgccaacacccgccagcgc
tatgtgcaggtcatgggcccgcacaagctcgatgcaatgacccgcatcctggaaaccgaa
gagttcgacggcgttatcgcgttcgtccggaccaaggctgccaccgaagacctggctgac
aagctcaaggaccgcggctacaacgccgccgccatcaacggcgacatcccgcagcagcag
cgcgaacgcacggtcgaggccctccgcgacggcaagatcgacatcctggttgccacggat
gttgccgcccgaggcctcgacgtcgagcgcatcagccacgtcgtcaactacgacatcccg
cacgacacggagtcctacgtccaccgcatcggccgcaccggccgtgcaggacgcaccggc
gacgccatcctgttcatgaccccgcgcgagaagtacctgctgcgggccattgaaaaggca
acccgccagccggtggagcacatgcagctccccagcgtcgacgttgtcaacgagaagcgc
ctggccaagttctccgagaagatcacggaaaccctcggttccgaggacatcgcggtgttc
cgggacctggtgaccaagtacctggccgagcacgaagttcccgccgaagacgttgcagca
gccctggccgtcatggcccagggtggccgcgacctgctgctgcgggaaatcccggtggct
ccggcccgccagcgcgagcgttccgaaggccgcaacgacggcgtcggctcccgcggcccg
acgcgcccgctgaccgaaggcaatgcaacgtaccgcatcgccgtcggccgtcgccagcgc
gtcctgcccggctcgattgtcggcgccattgccaacgagggcggcctgtcctccgcacag
atcggcggcatcgatatccgtgccgaccacaccctggtggagctgcccgctgacctgtcc
aaggatcagctgcgcgccctgtcccgcacccggatcggcggcgagctgatccacctcgag
ctggacaagggccgcaagccggcccgcgagcgtgaaggcggcggcagcttcaacgaccgc
gccgaccgcggcggcttcaagaaggatttcaagaagcgcgacggcgagcgttccttcggg
gaccgcggcagcgaccgcccgttcaagaagcgtgaaggcggcttccgcgacgcagccgcc
accggtgcccgcaagccccgcttccgcgactag
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