Azospirillum thermophilum: DEW08_05965
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Entry
DEW08_05965 CDS
T05917
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
azz
Azospirillum thermophilum
Pathway
azz03030
DNA replication
azz03430
Mismatch repair
azz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DEW08_05965
03430 Mismatch repair
DEW08_05965
03440 Homologous recombination
DEW08_05965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azz03032
]
DEW08_05965
03400 DNA repair and recombination proteins [BR:
azz03400
]
DEW08_05965
Enzymes [BR:
azz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DEW08_05965
DNA replication proteins [BR:
azz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DEW08_05965
DNA repair and recombination proteins [BR:
azz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DEW08_05965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AWK85886
UniProt:
A0A2S2CN39
LinkDB
All DBs
Position
1:complement(1329111..1332596)
Genome browser
AA seq
1161 aa
AA seq
DB search
MPHADFIHLRVHSAYSLSEGAIKVKELVKLCLKQQMPAVAVTDTGNLFGALEFALAAADA
GVQPIIGTVLGITRIGPAPTRPGLPGKAAHPDQIVLLCQNEQGYRNLMKLVSKAFLESDP
MAGPQIPMEALEGRSDGLIALTGGPAGPIGRLLAEGQKDLALETLERMKALFPGRLYVEL
QRHSGHFQEMEDTVEPALVELAYAHDLPLVATNDCHFATPDLYQAHDALLCIAEGAYLSQ
TERRRLTPDHCFKSAEEMRLLFADLPEAVDNTLVIARRCSFLLRPIKPILPPFACEGGRT
EDDELRAQARAGLEMRLEKVVYTPGMTAEQREQTRKTYFERLEFELDVIVKMKFPGYFLI
VSDFIKWAKSQDIPVGPGRGSGAGSVVAWALTITDLDPLRFGLLFERFLNPERVSMPDFD
VDFCQDRREEVIRYVQDKYGYDRVAQIITFGKLQARAVLRDVGRVLQMPYGQVDKICKLV
PNNPANPVTLQQALDSEEMLRQARDGDETVRHLIDIALKLEGLYRHASTHAAGVVIADRP
LDELVPLYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKTAVDLIPGKPDLTTV
TLDDEKTYHLLSRAEATGVFQLESSGMRDVLRRLKPNRLEDIIALVSLYRPGPMDNIPKY
IRVKNGEEPPDYMNPTLEPILKETFGIMIYQEQVMQIAQVLSGYSLGGADLLRRAMGKKI
KEEMDAQRKIFCDGAEQRGVAAEQASMIFDQVMKFAGYGFNKSHAAAYALVAYHTAYLKA
NHPVEFMAASMTLDLGNTDKLNVFRQELARLKIRLLPPDINKSSAIFGVEALPDGSKAVR
YALAAVKGVGLPAMKAVVEERAKNGPYKSLFDFARRLDLKTINKRQLENLTCAGAFDGLN
PNRAQVHAALETLIRYAQAEAAERESGIGNLFGGTGLGSGLKEPDLPKVADWEPLEKLKH
EFGAIGFYLSAHPLDAFSGPLNRMRVVRSAELAQAVSRGGSTRYKMAGIVVSRKEKTAKS
GNRFAFVELSDATGGYEVTCFSEVLAANRDLLEAGRPVLMTIDAQVNGEDIRLTCQEVKP
LEEAVASVSDGLRIVLRDPAPLDSLRGTLERLNRGKGRIHLLVELDALREVEIQLPDTYT
ITAQSRAALKAVPGVVEVAEL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgccgatttcatccacctgcgcgtccattccgcctactccctgtcggaaggc
gcgatcaaggtgaaggagctggtgaagctctgcctgaagcagcagatgccggcggtcgcg
gtcaccgacaccggcaacctgttcggcgcgctggaattcgcgctggccgccgccgatgcc
ggcgtgcagccgatcatcggcacggtgctgggcatcacccgcatcggcccggcgcccacc
cgccccggcctgcccggcaaggcggcgcatcccgaccagatcgtcctgctgtgccagaac
gagcagggctaccggaacctgatgaagctggtctccaaggccttcctcgagtcggatccg
atggccggcccgcagatcccgatggaggcgctggagggtcgctcggacggactgatcgcg
ctgaccggcggcccggccggtccgatcggccggctgctggcggagggccagaaggatctg
gcgctggagacgctggagcggatgaaggcgctgttccccggccggctctatgtcgagctg
cagcggcacagcggccatttccaggagatggaggacacggtcgagccggcgctggtcgag
ctcgcctacgcgcacgacctgccgctggtggcgaccaacgactgccacttcgccacgccg
gacctgtatcaggcgcacgacgcgctgctgtgcatcgccgagggcgcctatctcagccag
accgagcggcggcggctgacgcccgaccattgcttcaagtcggcggaggagatgcggctc
ctcttcgccgacctgccggaggcggtggacaacacgctggtgatcgcccggcgctgctcc
ttcctgctgcgcccgatcaagccgatcctgccgcccttcgcctgcgaaggcggccgcacc
gaggacgacgaactgcgcgcccaggcccgcgccgggctggagatgcggctggagaaggtc
gtctacactcccggcatgacggccgagcagcgcgaacagacccgcaagacctatttcgag
cggctggagttcgagctggacgtcatcgtcaagatgaagttccccggctacttcctgatc
gtgtcggacttcatcaaatgggcgaagagccaggacatcccggtcgggccgggccgcggc
tcgggcgccggctcggtcgtcgcctgggcgctgaccatcaccgacctcgaccccctgcgc
ttcggcctgctgttcgagcggttcctgaaccccgaacgcgtgtcgatgcccgacttcgac
gtcgacttctgccaggaccgccgcgaagaggtgatccgctacgtccaggacaagtacggc
tacgaccgcgtcgcccagatcatcaccttcggtaagctgcaggcgagggcggtgctgcgc
gacgtcgggcgcgtgctgcagatgccctacgggcaggtcgacaagatctgcaagctggtg
ccgaacaatccggccaacccggtgacgctgcagcaggcgctcgacagcgaggagatgctg
cgccaggcccgcgacggcgacgagacggtgcgccacctgatcgacatcgcgctgaagctg
gaaggcctctaccgccacgcctcgacccacgcggccggcgtggtgatcgccgaccggccg
ctggacgagctggtgccgctctaccgcgatccgcggtcggacatgccggtcacccagttc
aacatgaagtatgtcgagcaggccggcctggtgaagttcgacttcctcggcctgaagact
ctgaccgtgctgaagacggcggtcgacctgattcccgggaagccggacctgacgaccgtc
acgctggacgacgagaagacgtaccatcttctcagccgggcggaggcgaccggcgtgttc
cagctcgaaagttcgggcatgcgcgacgtgctgcgccgcctgaagccgaaccggctggag
gacatcatcgcgctggtgtcgctctaccgccccggcccgatggacaacatcccgaaatac
atccgggtgaagaacggcgaggagccgccggactacatgaacccgaccctggagccgatc
ctgaaggagaccttcgggatcatgatctaccaggagcaggtcatgcagatcgcgcaggtg
ctgtccggctattcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaagatc
aaggaggagatggacgcccagcggaagatcttctgcgacggcgccgaacagcggggcgtg
gccgccgagcaggcctcgatgatcttcgaccaggtgatgaagttcgccggctacggcttc
aacaagagccatgccgcggcctatgcgctggtcgcctaccacaccgcctacctgaaggcg
aaccacccggtggagttcatggcggcgtcgatgacgctcgacctcggcaacaccgacaag
ctgaacgtcttccggcaggagctggcacgcctgaagatccggctgctgccgccggacatc
aacaaatcctcggccatcttcggcgtggaggcgctgccggacgggtcgaaggcggtgcgc
tacgcgctggctgccgtgaagggcgtcgggctgccggccatgaaggcggtggtggaggag
cgggcgaagaacggcccctacaagagcctgttcgacttcgcccgccggctggacctgaag
acgatcaacaagcgccagctcgagaacctgacctgcgccggtgccttcgacgggctgaac
cccaaccgggcgcaggtgcatgcggcgctggagacgctgatccgctatgcccaggccgag
gcggcggaacgcgagagcggcatcggcaacctgttcggcggcacgggcctgggcagcggc
ctgaaggagccggacctgccgaaggtggccgactgggaaccgctggagaagctgaagcac
gagttcggcgccatcggcttctacctgtcggcccacccgctcgacgccttctcgggtccg
ctcaaccgcatgagggtggtcaggtcggcggagttggcccaggccgtctcgcgcggcgga
tccacccgctacaagatggcggggatcgtcgtcagccggaaggagaagaccgccaagtcg
ggcaaccgcttcgccttcgtcgagctgtcggacgccaccggcggctacgaggtcacctgc
ttctcggaggtgctggcggccaaccgcgacctgctggaggccggacggccggtgctgatg
acgatcgacgcccaggtcaacggcgaggacatccgcctgacctgccaggaggtcaagccg
ctggaggaggcggtcgcctcggtcagcgacgggctgcgcatcgtcctgcgcgaccccgcc
cccctcgactcgctgcgcggcacgctggagcggctcaaccgcggcaagggccgcatccat
cttctggtggagctcgacgccctgcgggaggtggagatccagcttcccgacacctacacc
atcacggcgcagagccgcgccgccctgaaggccgtgccgggcgtggtggaggtggcggag
ctctga
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